RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 OR2A1Q8NGT9 310 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 ASB11Q8WXH4 323 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 MIPEPQ99797 713 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 TUBB2BQ9BVA1 445 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 ACAT2Q9BWD1 397 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 SLC12A9Q9BXP2 914 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 CCDC68Q9H2F9 335 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 CAB39LQ9H9S4 337 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 SLC6A20Q9NP91 592 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 STARD5Q9NSY2 213 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 ABCF3Q9NUQ8 709 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 SH2B3Q9UQQ2 575 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 VPS9D1Q9Y2B5 631 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 PIEZO2Q9H5I5 2752 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 MED13Q9UHV7 2174 aa13.07□□□□□ -0.32
SNF8-206ENST00000509989 TCRBV9S1A1TA0A576 114 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 MYO1CO00159 1063 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 MATN2O00339 956 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 CTSVO60911 334 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 VPS26AO75436 327 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 SCRG1O75711 98 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 MED26O95402 600 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 FURINP09958 794 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 MPC1LP0DKB6 136 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 ERGP11308 486 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 SAT1P21673 171 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 ECHS1P30084 290 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 STAT5AP42229 794 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 RPS18P62269 152 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 SNRPNP63162 240 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 NFKB2Q00653 900 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 ACY1Q03154 408 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 FRG1Q14331 258 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 KIR2DS3Q14952 304 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 CYP2A13Q16696 494 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 SLC5A12Q1EHB4 618 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 C6orf15Q6UXA7 325 aaPredicted RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 ZC3HC1Q86WB0 502 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 LRRC56Q8IYG6 542 aaPredicted RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 BBOF1Q8ND07 529 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 OR9A1PQ8NGU1 263 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 PYROXD1Q8WU10 500 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 CT55Q8WUE5 264 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 ZNF480Q8WV37 535 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 TTC9Q92623 222 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 LINGO1Q96FE5 620 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 ZPBPQ9BS86 351 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 UNKQ9C0B0 810 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 LRRC4CQ9HCJ2 640 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 PDE7BQ9NP56 450 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 TRMT6Q9UJA5 497 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 CROTQ9UKG9 612 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 PDE10AQ9Y233 779 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 MTO1Q9Y2Z2 717 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 UTP11Q9Y3A2 253 aaKnown RBP13.06□□□□□ -0.32
SNF8-206ENST00000509989 PCDHB11Q9Y5F2 797 aa13.06□□□□□ -0.32
SNF8-206ENST00000509989 SCN3AQ9NY46 2000 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 IGKV1-8A0A0C4DH67 115 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 SLC16A8O95907 504 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 SYF2O95926 243 aaKnown RBP13.05□□□□□ -0.32
SNF8-206ENST00000509989 IMPA1P29218 277 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 MAGEA4P43358 317 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 TAS2R39P59534 338 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
SNF8-206ENST00000509989 SF1Q15637 639 aaKnown RBP13.05□□□□□ -0.32
SNF8-206ENST00000509989 PTCHD3Q3KNS1 767 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 LINC00303Q3SY05 128 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 FIGLAQ6QHK4 219 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 KIAA0408Q6ZU52 694 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 NEK10Q6ZWH5 1172 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 UBE2R2Q712K3 238 aaPredicted RBP13.05□□□□□ -0.32
SNF8-206ENST00000509989 GALNT7Q86SF2 657 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 PALM2Q8IXS6 379 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 SNRNP27Q8WVK2 155 aaKnown RBP13.05□□□□□ -0.32
SNF8-206ENST00000509989 ANKRD49Q8WVL7 239 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 SEMA4CQ9C0C4 833 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 LHX9Q9NQ69 397 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 ZFATQ9P243 1243 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 STOX2Q9P2F5 926 aaPredicted RBP13.05□□□□□ -0.32
SNF8-206ENST00000509989 VWA7Q9Y334 891 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 COMMD10Q9Y6G5 202 aa13.05□□□□□ -0.32
SNF8-206ENST00000509989 TNRC6AQ8NDV7 1962 aaKnown RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 FAM95CA0A1B0GW59 222 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 FAM159BA6NKW6 160 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 E7ENX8 843 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 ZNF749O43361 778 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 RPN2P04844 631 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 CAPN1P07384 714 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 CBSLP0DN79 551 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 MAP4P27816 1152 aaKnown RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 OAS2P29728 719 aaKnown RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 CBSP35520 551 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 DLSTP36957 453 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 CCNFP41002 786 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 SKIV2L2P42285 1042 aaKnown RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 ATP1A2P50993 1020 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms