RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SDC3O75056 442 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 CCNDBP1O95273 360 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 TGDSO95455 350 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 EML2O95834 649 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 RETP07949 1114 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 ZNF883P0CG24 379 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
RFC1-211ENST00000509084 TAP2Q03519 686 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 CDC16Q13042 620 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 PLCL1Q15111 1095 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 RBBP7Q16576 425 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 LPAL2Q16609 132 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 HLA-BQ31612 363 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 INAVAQ3KP66 663 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 C14orf28Q4W4Y0 310 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 ARL13AQ5H913 290 aaPredicted RBP10.06□□□□□ -0.8
RFC1-211ENST00000509084 PRAMEF14Q5SWL7 426 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 PRAMEF13Q5VWM6 474 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 KLHL35Q6PF15 583 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 OGFOD3Q6PK18 319 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 LCTLQ6UWM7 567 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 FAM47EQ6ZV65 393 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 EFL1Q7Z2Z2 1120 aaKnown RBP10.06□□□□□ -0.8
RFC1-211ENST00000509084 CPLX4Q7Z7G2 160 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 CUZD1Q86UP6 607 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 THOC6Q86W42 341 aaKnown RBP10.06□□□□□ -0.8
RFC1-211ENST00000509084 AMIGO1Q86WK6 493 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 WDR75Q8IWA0 830 aaKnown RBP10.06□□□□□ -0.8
RFC1-211ENST00000509084 LRRC34Q8IZ02 419 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 ARL10Q8N8L6 244 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 SNX31Q8N9S9 440 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 OR6C4Q8NGE1 309 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 PIWIL2Q8TC59 973 aaKnown RBP10.06□□□□□ -0.8
RFC1-211ENST00000509084 TRPC4APQ8TEL6 797 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 LCN9Q8WX39 176 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 ATP6V1E2Q96A05 226 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 MED8Q96G25 268 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 FAR2Q96K12 515 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 MENTQ9BUN1 341 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 ARRDC1-AS1Q9H2J1 176 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 GAREM1Q9H706 876 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 IPPKQ9H8X2 491 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 SLC40A1Q9NP59 571 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 PFDN4Q9NQP4 134 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 FGFR1OP2Q9NVK5 253 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 EVA1BQ9NVM1 165 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 KCNE2Q9Y6J6 123 aa10.06□□□□□ -0.8
RFC1-211ENST00000509084 PCDH15Q96QU1 1955 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 LRRC14BA6NHZ5 514 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 LILRA5A6NI73 299 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 MATN2O00339 956 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ITM2AO43736 263 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 NOBOXO60393 691 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 CRCPO75575 148 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 FKBP9O95302 570 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 FAM107AO95990 144 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ENO1P06733 434 aaKnown RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 EBLN1P0CF75 366 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 GNAZP19086 355 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ARL1P40616 181 aaPredicted RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 RPL14P50914 215 aaKnown RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 CCNG1P51959 295 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 CDH13P55290 713 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 CBX1P83916 185 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 PCDH1Q08174 1060 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 GPR18Q14330 331 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 NAA25Q14CX7 972 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 SHBQ15464 509 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 DEFB133Q30KQ1 61 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 C18orf21Q32NC0 220 aaPredicted RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 GGTA1PQ4G0N0 100 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 PLA2G2CQ5R387 149 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 THEMIS2Q5TEJ8 643 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ZCCHC8Q6NZY4 707 aaKnown RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 TMEM26Q6ZUK4 368 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 GPRIN3Q6ZVF9 776 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 OOSP2Q86WS3 158 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 C17orf82Q86X59 251 aaPredicted RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 LRRC56Q8IYG6 542 aaPredicted RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 GPR156Q8NFN8 814 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 AGAP11Q8TF27 550 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ESAMQ96AP7 390 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 SORT1Q99523 831 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 NTMT1Q9BV86 223 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 TRIM55Q9BYV6 548 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 SRMSQ9H3Y6 488 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 NOL11Q9H8H0 719 aaKnown RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 ZBTB26Q9HCK0 441 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 MID1IP1Q9NPA3 183 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 SLCO1B3Q9NPD5 702 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 SEMA4BQ9NPR2 832 aaPredicted RBP10.05□□□□□ -0.8
RFC1-211ENST00000509084 UCKL1Q9NWZ5 548 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 VTI1BQ9UEU0 232 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 TRPS1Q9UHF7 1281 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ICKQ9UPZ9 632 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 SLC22A14Q9Y267 594 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 ENTPD2Q9Y5L3 495 aa10.05□□□□□ -0.8
RFC1-211ENST00000509084 BDP1A6H8Y1 2624 aa10.04□□□□□ -0.8
RFC1-211ENST00000509084 TMEM131Q92545 1883 aa10.04□□□□□ -0.8
RFC1-211ENST00000509084 TRBV23OR9-2A0A075B6M9 112 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms