RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 PCMTD2Q9NV79 361 aa15□□□□□ -0.01
CLDND1-211ENST00000506575 GEMIN8Q9NWZ8 242 aaKnown RBP15□□□□□ -0.01
CLDND1-211ENST00000506575 KLHL42Q9P2K6 505 aa15□□□□□ -0.01
CLDND1-211ENST00000506575 POLHQ9Y253 713 aa15□□□□□ -0.01
CLDND1-211ENST00000506575 KLHL20Q9Y2M5 609 aa15□□□□□ -0.01
CLDND1-211ENST00000506575 BAHCC1Q9P281 2608 aa15□□□□□ -0.01
CLDND1-211ENST00000506575 HELZ2Q9BYK8 2649 aaKnown RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 PCM1Q15154 2024 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 KRT87PA6NCN2 255 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 ARHGEF33A8MVX0 844 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 EFCAB8A8MWE9 144 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 PSIP1O75475 530 aaKnown RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 SEC31AO94979 1220 aaKnown RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 ENO3P13929 434 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 AGXTP21549 392 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 RORAP35398 523 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 ELK3P41970 407 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 GABRA4P48169 554 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 RPS18P62269 152 aaKnown RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 NFATC3Q12968 1075 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 KCNAB2Q13303 367 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 HP1BP3Q5SSJ5 553 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 UGT3A1Q6NUS8 523 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 HIBCHQ6NVY1 386 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 TLDC1Q6P9B6 456 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 ZNF517Q6ZMY9 492 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 SYVN1Q86TM6 617 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 DNAJC22Q8N4W6 341 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 C2CD4AQ8NCU7 369 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 OR9A1PQ8NGU1 263 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 HMGCLL1Q8TB92 370 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 DENND1AQ8TEH3 1009 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 LRRC39Q96DD0 335 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 CERS2Q96G23 380 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 CFAP36Q96G28 342 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 RUFY1Q96T51 708 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 GPR21Q99679 349 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 SLC30A3Q99726 388 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 SPRTNQ9H040 489 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 TXLNGQ9NUQ3 528 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 ZC3H7BQ9UGR2 993 aaKnown RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 TRMT6Q9UJA5 497 aaKnown RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 SRPK3Q9UPE1 567 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 CHMP2BQ9UQN3 213 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 DHRS7Q9Y394 339 aa14.99□□□□□ -0.01
CLDND1-211ENST00000506575 HEMK1Q9Y5R4 338 aaPredicted RBP14.99□□□□□ -0.01
CLDND1-211ENST00000506575 ZNF839A8K0R7 811 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 B8ZZF3 427 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 C9J4A7 227 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 FANCGO15287 622 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 ZSCAN9O15535 394 aaPredicted RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 RAB40ALP0C0E4 278 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 MPC1LP0DKB6 136 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 CBSLP0DN79 551 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 CBSP35520 551 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 CARSP49589 748 aaKnown RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 PTCHD3Q3KNS1 767 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 ZC3H12BQ5HYM0 836 aaKnown RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 FIGLAQ6QHK4 219 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 KIAA0408Q6ZU52 694 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 IGDCC3Q8IVU1 814 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 C17orf53Q8N3J3 647 aaPredicted RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 ZNF655Q8N720 491 aaPredicted RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 ENDOVQ8N8Q3 282 aaKnown RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 GIMAP7Q8NHV1 300 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 CD200R1Q8TD46 325 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 ZUFSPQ96AP4 578 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 PWWP2AQ96N64 755 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 MIPEPQ99797 713 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 C17orf62Q9BQA9 187 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 AARSD1Q9BTE6 412 aaKnown RBP14.98□□□□□ -0.01
CLDND1-211ENST00000506575 NDC1Q9BTX1 674 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 NLNQ9BYT8 704 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 SLC25A18Q9H1K4 315 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 EURLQ9NYK6 297 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 TUBD1Q9UJT1 453 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 SNX7Q9UNH6 387 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 MAN2B2Q9Y2E5 1009 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 MED16Q9Y2X0 877 aa14.98□□□□□ -0.01
CLDND1-211ENST00000506575 TARM1B6A8C7 271 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 MYO1CO00159 1063 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 EIF3FO00303 357 aaPredicted RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 HCRTR1O43613 425 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 ZBTB14O43829 449 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 PRICKLE3O43900 615 aaPredicted RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 SYF2O95926 243 aaKnown RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 FURINP09958 794 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 PSMB5P28074 263 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 RPA3P35244 121 aaPredicted RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 HSD17B2P37059 387 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 SKIV2L2P42285 1042 aaKnown RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 ETF1P62495 437 aaKnown RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 TSTA3Q13630 321 aaPredicted RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 ARHGAP19Q14CB8 494 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 NAA25Q14CX7 972 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 CYP2A13Q16696 494 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 UGT8Q16880 541 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.97□□□□□ -0.01
CLDND1-211ENST00000506575 FCRL6Q6DN72 434 aa14.97□□□□□ -0.01
CLDND1-211ENST00000506575 LCN10Q6JVE6 187 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms