RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 IKZF3Q9UKT9 509 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 KLHL20Q9Y2M5 609 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 TMEM184BQ9Y519 407 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 PCDHB11Q9Y5F2 797 aa17.6■□□□□ 0.41
PDLIM7-216ENST00000506537 TEX51A0A1B0GUA7 166 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 HCRTR1O43613 425 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 STK17BO94768 372 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 DLGAP3O95886 979 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 ZNF37AP17032 561 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 GP5P40197 560 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 IL2P60568 153 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 TUBB4BP68371 445 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 ACY1Q03154 408 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 C19orf48Q6RUI8 117 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 CDHR3Q6ZTQ4 885 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 TIPARPQ7Z3E1 657 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 CTAGE3PQ8IX95 158 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 MYO1HQ8N1T3 1032 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 PPM1NQ8N819 430 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 ZNF480Q8WV37 535 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 CAB39LQ9H9S4 337 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 PDE7BQ9NP56 450 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 PILRAQ9UKJ1 303 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 RARRES3Q9UL19 164 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 NFU1Q9UMS0 254 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 PDE10AQ9Y233 779 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 PTPRQQ9UMZ3 2332 aa17.59■□□□□ 0.41
PDLIM7-216ENST00000506537 WISP3O95389 354 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 SLC16A8O95907 504 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 SYF2O95926 243 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 MSL3P1P0C860 447 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 MAGP20916 626 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 OAS2P29728 719 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 GABRA4P48169 554 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 YBX1P67809 324 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 SP140Q13342 867 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 PHKG1Q16816 387 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 TMTC4Q5T4D3 741 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 KIAA1614Q5VZ46 1190 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 PWWP2BQ6NUJ5 590 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 MBOAT1Q6ZNC8 495 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 PPP1R3BQ86XI6 285 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 RAB42Q8N4Z0 105 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 ANKRD49Q8WVL7 239 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 GPR22Q99680 433 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 SLC12A9Q9BXP2 914 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 ULBP3Q9BZM4 244 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 LNPEPQ9UIQ6 1025 aa17.58■□□□□ 0.4
PDLIM7-216ENST00000506537 ZBTB14O43829 449 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 RAD1O60671 282 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 KIAA0754O94854 1291 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 C8GP07360 202 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 MAP4P27816 1152 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 IMPA1P29218 277 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 PNLIPRP1P54315 467 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 NAB1Q13506 487 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 ARHGAP19Q14CB8 494 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 DEFB110Q30KQ9 67 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 SUSD1Q6UWL2 747 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 CEP128Q6ZU80 1094 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 VASH2Q86V25 355 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 IFT20Q8IY31 132 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 LRRC56Q8IYG6 542 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 PPFIBP2Q8ND30 876 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 OR2A1Q8NGT9 310 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 OR1L3Q8NH93 324 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 NKD1Q969G9 470 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 SLC22A18Q96BI1 424 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 PDLIM5Q96HC4 596 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 MIPEPQ99797 713 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 FUT8Q9BYC5 575 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 CHRNA10Q9GZZ6 450 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 TSPYL1Q9H0U9 437 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 TXNDC16Q9P2K2 825 aa17.57■□□□□ 0.4
PDLIM7-216ENST00000506537 TMEM150CB9EJG8 249 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 E7ENX8 843 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 SLC16A5O15375 505 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 NRP2O60462 931 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 ACSL3O95573 720 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 CTSBP07858 339 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 CYP2A7P20853 494 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 POU4F1Q01851 419 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 TAP2Q03519 686 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 ILF2Q12905 390 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 SF1Q15637 639 aaKnown RBP17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 COL28A1Q2UY09 1125 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 GRTP1Q5TC63 336 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 PRAMEF17Q5VTA0 474 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 FCRL6Q6DN72 434 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 CYB5D1Q6P9G0 228 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 OR2L3Q8NG85 312 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 SMPDL3AQ92484 453 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 TCTN2Q96GX1 697 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 ACSS3Q9H6R3 686 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 PARVBQ9HBI1 364 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 POPDC3Q9HBV1 291 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 MGAQ8IWI9 3026 aa17.56■□□□□ 0.4
PDLIM7-216ENST00000506537 LOC400499M0QZD8 3231 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms