RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 FGF1P05230 155 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 USP17L7P0C7H9 530 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 CCR1P32246 355 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 FLT3LGP49771 235 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 AP2S1P53680 142 aaPredicted RBP15.52■□□□□ 0.07
SCLT1-208ENST00000506368 EIF4EBP2Q13542 120 aaPredicted RBP15.52■□□□□ 0.07
SCLT1-208ENST00000506368 CCL14Q16627 93 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 AP5B1Q2VPB7 878 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 TTLL9Q3SXZ7 439 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 GPAT3Q53EU6 434 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 LRIF1Q5T3J3 769 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 FAHD1Q6P587 224 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 TRAF7Q6Q0C0 670 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 SPATC1Q76KD6 591 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 ZNF367Q7RTV3 350 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 NRARPQ7Z6K4 114 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 LDB1Q86U70 411 aaPredicted RBP15.52■□□□□ 0.07
SCLT1-208ENST00000506368 ZFAND1Q8TCF1 268 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 ZNF675Q8TD23 568 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 SLC7A6Q92536 515 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 ZFYVE19Q96K21 471 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 SDHCQ99643 169 aaPredicted RBP15.52■□□□□ 0.07
SCLT1-208ENST00000506368 TMEM245Q9H330 911 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 NUDT4Q9NZJ9 180 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 KLHL21Q9UJP4 597 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 U3KQV3 271 aa15.52■□□□□ 0.07
SCLT1-208ENST00000506368 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 SMIM28A0A1B0GU29 152 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 SLC35F4A4IF30 521 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 CLCA1A8K7I4 914 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 RGS14O43566 566 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 EPOP01588 193 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 PRDX3P30048 256 aaKnown RBP15.51■□□□□ 0.07
SCLT1-208ENST00000506368 HOXA9P31269 272 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 TGFBR1P36897 503 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 LHX1P48742 406 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 DGKQP52824 942 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 LILRA4P59901 499 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 NPRL3Q12980 569 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 TSNQ15631 228 aaKnown RBP15.51■□□□□ 0.07
SCLT1-208ENST00000506368 IL27RAQ6UWB1 636 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 RNF130Q86XS8 419 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 TMEM86AQ8N2M4 240 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 TMEM132CQ8N3T6 1108 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 OR4L1Q8NH43 312 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 METTL6Q8TCB7 284 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 TBATAQ96M53 351 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 WDFY2Q96P53 400 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 ACOX2Q99424 681 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 DPY30Q9C005 99 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 SLC22A4Q9H015 551 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 KCNH6Q9H252 994 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 PDGFCQ9NRA1 345 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 SPASTQ9UBP0 616 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 UTS2RQ9UKP6 389 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 SNX6Q9UNH7 406 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 MAN2B2Q9Y2E5 1009 aa15.51■□□□□ 0.07
SCLT1-208ENST00000506368 POLR3HQ9Y535 204 aaPredicted RBP15.51■□□□□ 0.07
SCLT1-208ENST00000506368 A0A096LPI6 279 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 SLC28A1O00337 649 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 ARHGAP33O14559 1287 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 PGRP06401 933 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 UBL4AP11441 157 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 HOXA11P31270 313 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 OR3A3P47888 321 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 GZMMP51124 257 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 HSPA14Q0VDF9 509 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 PCBP2Q15366 365 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 SIRPB2Q5JXA9 342 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 MARC1Q5VT66 337 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 CACHD1Q5VU97 1274 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 ERICH5Q6P6B1 374 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 PAQR3Q6TCH7 311 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 BHLHA9Q7RTU4 235 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 APH1BQ8WW43 257 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 SMOQ99835 787 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 RACGAP1Q9H0H5 632 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 NIPAL2Q9H841 368 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 ATP13A2Q9NQ11 1180 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 FLRT1Q9NZU1 646 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 GALPQ9UBC7 116 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 GBF1Q92538 1859 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 DNAJC25-GNG10A0A024R161 153 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 ZSCAN5BA6NJL1 495 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 LGALS2P05162 132 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 ALPPP05187 535 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 FABP3P05413 133 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 TXNP10599 105 aaKnown RBP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 HLA-DMAP28067 261 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 CA5AP35218 305 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 CD86P42081 329 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 IL12RB1P42701 662 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 GNPDA1P46926 289 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 RGS6P49758 472 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 CSTF3Q12996 717 aaKnown RBP15.5■□□□□ 0.07
SCLT1-208ENST00000506368 C19orf48Q6RUI8 117 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 GDPGP1Q6ZNW5 385 aa15.5■□□□□ 0.07
SCLT1-208ENST00000506368 ZSWIM9Q86XI8 627 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms