RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 LRRC70Q7Z2Q7 622 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 C8orf59Q8N0T1 100 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 TERB1Q8NA31 727 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 PRAP1Q96NZ9 151 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 SLC38A3Q99624 504 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 POPDC3Q9HBV1 291 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 ARNT2Q9HBZ2 717 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 IGSF5Q9NSI5 407 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 C3orf18Q9UK00 162 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 DNAJC15Q9Y5T4 150 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 SLC35G6P0C7Q6 338 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CHN2P52757 468 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 RAB8AP61006 207 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 MINDY4Q4G0A6 757 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 KLHL35Q6PF15 583 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 FAM43BQ6ZT52 329 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 RFLNAQ6ZTI6 216 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 GLMNQ92990 594 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 APOL4Q9BPW4 351 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CEP44Q9C0F1 390 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 KLHL20Q9Y2M5 609 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 STON1Q9Y6Q2 735 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 OR10H3O60404 316 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 UMPSP11172 480 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 DNAJB1P25685 340 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 VARSP26640 1264 aaKnown RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CLCN4P51793 760 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 RPS13P62277 151 aaKnown RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 LAPTM5Q13571 262 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 ZNF234Q14588 700 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 HEPACAMQ14CZ8 416 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 LPCAT2Q7L5N7 544 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CDK20Q8IZL9 346 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 TRAM1L1Q8N609 369 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 MYEOVQ96EZ4 313 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CDH7Q9ULB5 785 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 EMCNQ9ULC0 261 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CLEC4EQ9ULY5 219 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 PIAS3Q9Y6X2 628 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 LIN7AO14910 233 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 PON2Q15165 354 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 TMEM240Q5SV17 173 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 DENND5AQ6IQ26 1287 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 ADAMTS15Q8TE58 950 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 ERI3O43414 337 aaKnown RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 EBLN1P0CF75 366 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 DHRS4L1P0CG22 281 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CCR3P51677 355 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 MRPL58Q14197 206 aaKnown RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CST6Q15828 149 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 HSD11B1LQ7Z5J1 315 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 PARP8Q8N3A8 854 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 GLB1L3Q8NCI6 653 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 PHOSPHO2Q8TCD6 241 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CGREF1Q99674 301 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 SEC14L3Q9UDX4 400 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 CORO2BQ9UQ03 480 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 GMPPBQ9Y5P6 360 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 DGKBQ9Y6T7 804 aa13.73□□□□□ -0.21
TCOF1-207ENST00000504761 TRIP12Q14669 1992 aaPredicted RBP13.73□□□□□ -0.21
TCOF1-207ENST00000504761 ADRB3P13945 408 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 TYRP1P17643 537 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 NT5EP21589 574 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 STX4Q12846 297 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 NFE2L1Q14494 772 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 MPP7Q5T2T1 576 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 TTC23Q5W5X9 447 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ZBTB46Q86UZ6 589 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SRFBP1Q8NEF9 429 aaKnown RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 OR9A1PQ8NGU1 263 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 BTN2A2Q8WVV5 523 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SMPDL3AQ92484 453 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 MYRFLQ96LU7 910 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 NSMCE3Q96MG7 304 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CHID1Q9BWS9 393 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CTPS2Q9NRF8 586 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CYP8B1Q9UNU6 501 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 KMOO15229 486 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CNOT3O75175 753 aaKnown RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CYP17A1P05093 508 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CDH1P12830 882 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ADRA1AP35348 466 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 HTR6P50406 440 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CCR8P51685 355 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 C1orf61Q13536 156 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CPXM2Q8N436 756 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 KCT2Q8NC54 265 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 C11orf65Q8NCR3 313 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CD200R1Q8TD46 325 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 VPS35Q96QK1 796 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 YIPF4Q9BSR8 244 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ARMC7Q9H6L4 198 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 LHX3Q9UBR4 397 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms