RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 MIS12Q9H081 205 aa5□□□□□ -1.61
TRAPPC13-206ENST00000504751 FN3KQ9H479 309 aa5□□□□□ -1.61
TRAPPC13-206ENST00000504751 SLC52A3Q9NQ40 469 aa5□□□□□ -1.61
TRAPPC13-206ENST00000504751 FLRT3Q9NZU0 649 aa5□□□□□ -1.61
TRAPPC13-206ENST00000504751 ZNF112Q9UJU3 913 aa5□□□□□ -1.61
TRAPPC13-206ENST00000504751 STUB1Q9UNE7 303 aa5□□□□□ -1.61
TRAPPC13-206ENST00000504751 ENO4A6NNW6 628 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 PMS2P5A8MQ11 134 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM72CH0Y354 149 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 ZNF197O14709 1029 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 ARPC2O15144 300 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 SIX3O95343 332 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 PLA2G4BP0C869 781 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 IRF2P14316 349 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 CA6P23280 308 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 CD27P26842 260 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 CEACAM8P31997 349 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 NAGLUP54802 743 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 RBP5P82980 135 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 TAF13Q15543 124 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 XKR3Q5GH77 459 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 HECTD3Q5T447 861 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM72AQ5TYM5 149 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM72DQ6L9T8 149 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 IL17RELQ6ZVW7 336 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 USP43Q70EL4 1123 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 DNAJB7Q7Z6W7 309 aaPredicted RBP4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM72BQ86X60 149 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM219AQ8IW50 185 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 RASGEF1AQ8N9B8 481 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 TRIM58Q8NG06 486 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 OR10Q1Q8NGQ4 319 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 OCC1Q8TAD7 63 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 SETD6Q8TBK2 473 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 HES6Q96HZ4 224 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 ADPGKQ9BRR6 497 aa4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 URM1Q9BTM9 101 aaKnown RBP4.99□□□□□ -1.61
TRAPPC13-206ENST00000504751 TRAV34A0A0B4J273 112 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 HTR3EA5X5Y0 456 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 BLOC1S5-TXNDC5H3BN57 136 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 ATP6AP2O75787 350 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 CLPTM1O96005 669 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 GSRP00390 522 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 NGFP01138 241 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 CDH3P22223 829 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 ACAT1P24752 427 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 PSMA3P25788 255 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 PRKCIP41743 596 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 CRKLP46109 303 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 CAPZA1P52907 286 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 MAZP56270 477 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 POU5F1Q01860 360 aaKnown RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 BFSP1Q12934 665 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 HERC3Q15034 1050 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 LBHQ53QV2 105 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 ENPP7Q6UWV6 458 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 C11orf57Q6ZUT1 292 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 APLFQ8IW19 511 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 EID3Q8N140 333 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 OR4K1Q8NGD4 311 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 C9orf43Q8TAL5 461 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 DEPDC1BQ8WUY9 529 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 PROX1Q92786 737 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM162AQ96A26 154 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 TMEM143Q96AN5 459 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 ZNF501Q96CX3 271 aaPredicted RBP4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 INTS14Q96SY0 518 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 FERMT1Q9BQL6 677 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 OR2B2Q9GZK3 357 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 TCF19Q9Y242 345 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 POMT1Q9Y6A1 747 aa4.98□□□□□ -1.61
TRAPPC13-206ENST00000504751 TRAV24A0A0B4J272 114 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 ARHGEF37A1IGU5 675 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 C2orf81A6NN90 581 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM86B1E9PN63 330 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 CAVIN2O95810 425 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 GBAP04062 536 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 SP1P08047 785 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM86B2P0C5J1 330 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM58BPP0C7Q3 252 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 PRSS56P0CW18 603 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 PDGFRAP16234 1089 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 HOXC13P31276 330 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 VAMP7P51809 220 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 BMXP51813 675 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 KLC1Q07866 573 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 UGCGQ16739 394 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 KIAA1644Q3SXP7 199 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 SLC25A53Q5H9E4 307 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 C9orf50Q5SZB4 431 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 MPP7Q5T2T1 576 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 SUSD4Q5VX71 490 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM91A1Q658Y4 838 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 FAM53AQ6NSI3 398 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 MOXD1Q6UVY6 613 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 SLC16A9Q7RTY1 509 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 SPATA19Q7Z5L4 167 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 PIGZQ86VD9 579 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 LGI2Q8N0V4 545 aa4.97□□□□□ -1.61
TRAPPC13-206ENST00000504751 CNBD1Q8NA66 436 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms