RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 KCNAB2Q13303 367 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CTU2Q2VPK5 515 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 PGS1Q32NB8 556 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CDKL4Q5MAI5 379 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ASTLQ6HA08 431 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 R3HCC1LQ7Z5L2 792 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CHPFQ8IZ52 775 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 TMEM132CQ8N3T6 1108 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 SVOPLQ8N434 492 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 BEND7Q8N7W2 519 aaPredicted RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 CHST14Q8NCH0 376 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ASB11Q8WXH4 323 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 GFM2Q969S9 779 aaKnown RBP9.6□□□□□ -0.87
CLIP1-204ENST00000501271 DEFB118Q96PH6 123 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 OSBPL6Q9BZF3 934 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ADNPQ9H2P0 1102 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 BRD9Q9H8M2 597 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 USE1Q9NZ43 259 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 SPG21Q9NZD8 308 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 SNX6Q9UNH7 406 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 SLC22A14Q9Y267 594 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 ZNF510Q9Y2H8 683 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 U3KQV3 271 aa9.6□□□□□ -0.87
CLIP1-204ENST00000501271 C16orf96A6NNT2 1141 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 EIF3FO00303 357 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-204ENST00000501271 C8GP07360 202 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 PRPS2P11908 318 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 PRPH2P23942 346 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 DCTP40126 519 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 SPINT3P49223 89 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 MEP1AQ16819 746 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 BROXQ5VW32 411 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 CES5AQ6NT32 575 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 CNKSR3Q6P9H4 555 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 ELMSAN1Q6PJG2 1045 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 TCAIMQ8N3R3 496 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 ZCCHC7Q8N3Z6 543 aaKnown RBP9.59□□□□□ -0.87
CLIP1-204ENST00000501271 L3MBTL4Q8NA19 623 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 CHDHQ8NE62 594 aaPredicted RBP9.59□□□□□ -0.87
CLIP1-204ENST00000501271 MYLIPQ8WY64 445 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 TESCQ96BS2 214 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 ITCHQ96J02 903 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 APOLD1Q96LR9 279 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 HHIPQ96QV1 700 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 RBM4BQ9BQ04 359 aaKnown RBP9.59□□□□□ -0.87
CLIP1-204ENST00000501271 TUBA1CQ9BQE3 449 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 RBM4Q9BWF3 364 aaKnown RBP9.59□□□□□ -0.87
CLIP1-204ENST00000501271 EBPLQ9BY08 206 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 MAGIXQ9H6Y5 334 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 SLCO3A1Q9UIG8 710 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 CCL26Q9Y258 94 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 AP3M1Q9Y2T2 418 aa9.59□□□□□ -0.87
CLIP1-204ENST00000501271 TRAV19A0A0A6YYK7 116 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 TRIM64BA6NI03 449 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 PER2O15055 1255 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HS6ST1O60243 411 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HTR1AP08908 422 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HIST1H2AGP0C0S8 130 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 ATP1B2P14415 290 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 AMD1P17707 334 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 PFKLP17858 780 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HIST1H2ADP20671 130 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 TLE2Q04725 743 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 VAC14Q08AM6 782 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 TRIM60Q495X7 471 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 RBM48Q5RL73 367 aaKnown RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 TTC23Q5W5X9 447 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 LAIR2Q6ISS4 152 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 TTC23LQ6PF05 361 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 Q6ZVU0 165 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 ANKRD33Q7Z3H0 272 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 DRAXINQ8NBI3 349 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 DNAJB8Q8NHS0 232 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 FRS2Q8WU20 508 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HSPBAP1Q96EW2 488 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 CMTM7Q96FZ5 175 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HIST1H2AHQ96KK5 128 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HIST1H2AJQ99878 128 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 H2AFJQ9BTM1 129 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 SLC46A2Q9BY10 475 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 ATG10Q9H0Y0 220 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 RMND5AQ9H871 391 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 GALNT8Q9NY28 637 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 VNN3Q9NY84 501 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 GFYI3L273 518 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 WNT9AO14904 365 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 LILRB3O75022 631 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 SEC14L2O76054 403 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 PARNO95453 639 aaKnown RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 MPC1LP0DKB6 136 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 JUNBP17275 347 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 LAG3P18627 525 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 AGXTP21549 392 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 HNMTP50135 292 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 TPD52P55327 224 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 CD47Q08722 323 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 ABHD18Q0P651 414 aa9.58□□□□□ -0.88
CLIP1-204ENST00000501271 GRSF1Q12849 480 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLIP1-204ENST00000501271 EPS8Q12929 822 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms