RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 GRM7Q14831 915 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 CRB2Q5IJ48 1285 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 TSTD2Q5T7W7 516 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 PRAMEF13Q5VWM6 474 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 UNC5DQ6UXZ4 953 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 CUZD1Q86UP6 607 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 FAM20CQ8IXL6 584 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 RAB42Q8N4Z0 105 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 C2orf73Q8N5S3 287 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-211ENST00000498534 LRRC57Q8N9N7 239 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 SLC35B2Q8TB61 432 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 DNAJB14Q8TBM8 379 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 ZUFSPQ96AP4 578 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 BARD1Q99728 777 aaKnown RBP11.55□□□□□ -0.56
CNOT4-211ENST00000498534 LACRTQ9GZZ8 138 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 MRM3Q9HC36 420 aaKnown RBP11.55□□□□□ -0.56
CNOT4-211ENST00000498534 ZBTB20Q9HC78 741 aaPredicted RBP11.55□□□□□ -0.56
CNOT4-211ENST00000498534 SLC22A11Q9NSA0 550 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 FBXL4Q9UKA2 621 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 NXT1Q9UKK6 140 aaKnown RBP11.55□□□□□ -0.56
CNOT4-211ENST00000498534 RIMKLBQ9ULI2 386 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 KLHL20Q9Y2M5 609 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 FER1L5A0AVI2 2057 aa11.55□□□□□ -0.56
CNOT4-211ENST00000498534 TARM1B6A8C7 271 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 MASP2O00187 686 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 DSCR3O14972 297 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 SRPX2O60687 465 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 FKBP9O95302 570 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 CLDN1O95832 211 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 ONECUT2O95948 504 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 GOT2P00505 430 aaKnown RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 PEBP1P30086 187 aaKnown RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 FDFT1P37268 417 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 GRIA3P42263 894 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 GDF10P55107 478 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 FOXL2P58012 376 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 KIF5AQ12840 1032 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 KLF1Q13351 362 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 TMED2Q15363 201 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 NKG7Q16617 165 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 HIF1AQ16665 826 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 AARS2Q5JTZ9 985 aaKnown RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 ZNF787Q6DD87 383 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 FIGLAQ6QHK4 219 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 DCUN1D3Q8IWE4 304 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 TTC29Q8NA56 475 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 ST6GALNAC3Q8NDV1 305 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 OR13J1Q8NGT2 312 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 OR2L8Q8NGY9 312 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 RANBP9Q96S59 729 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 WDR77Q9BQA1 342 aaPredicted RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 SLC26A1Q9H2B4 701 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 EPS8L2Q9H6S3 715 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 ETNK1Q9HBU6 452 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 SLC6A20Q9NP91 592 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 SEMA3GQ9NS98 782 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 CUTCQ9NTM9 273 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 R3HDM2Q9Y2K5 976 aaKnown RBP11.54□□□□□ -0.56
CNOT4-211ENST00000498534 MRFAP1Q9Y605 127 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 PCSK5Q92824 1860 aa11.54□□□□□ -0.56
CNOT4-211ENST00000498534 POLEQ07864 2286 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 KPNA5O15131 536 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 GPC4O75487 556 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 SUN1O94901 812 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 SLCO2B1O94956 709 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 DCTP40126 519 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 TTPAP49638 278 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 PER3P56645 1201 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 RBBP7Q16576 425 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 TUBB8Q3ZCM7 444 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 PTRHD1Q6GMV3 140 aaKnown RBP11.53□□□□□ -0.56
CNOT4-211ENST00000498534 KIRREL2Q6UWL6 708 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 TAX1BP1Q86VP1 789 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 KCNMB4Q86W47 210 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 VRK3Q8IV63 474 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 LINC01555Q8NAE3 123 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 PPP4R1Q8TF05 950 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 SKA2Q8WVK7 121 aaPredicted RBP11.53□□□□□ -0.56
CNOT4-211ENST00000498534 INPP5DQ92835 1189 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 PEX13Q92968 403 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 RAD51AP1Q96B01 352 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 KCTD12Q96CX2 325 aaKnown RBP11.53□□□□□ -0.56
CNOT4-211ENST00000498534 SELENOSQ9BQE4 189 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 RAB11FIP5Q9BXF6 653 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 FRMD8P1Q9BZ68 369 aaPredicted RBP11.53□□□□□ -0.56
CNOT4-211ENST00000498534 LHPPQ9H008 270 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 SLC2A6Q9UGQ3 507 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 CIDEBQ9UHD4 219 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 NTNG1Q9Y2I2 539 aa11.53□□□□□ -0.56
CNOT4-211ENST00000498534 REXO2Q9Y3B8 237 aaKnown RBP11.53□□□□□ -0.56
CNOT4-211ENST00000498534 SNRNP200O75643 2136 aaKnown RBP11.53□□□□□ -0.56
CNOT4-211ENST00000498534 TCRBV7S2A1N4TA0A589 114 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 IQCF5A8MTL0 148 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 SOCS6O14544 535 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 PRMT5O14744 637 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 RASGRF2O14827 1237 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms