RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 LRFN5Q96NI6 719 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 RAB11FIP5Q9BXF6 653 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 ANKZF1Q9H8Y5 726 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 INTS10Q9NVR2 710 aaKnown RBP14.8□□□□□ -0.04
NUP50-219ENST00000497960 ZNF462Q96JM2 2506 aa14.8□□□□□ -0.04
NUP50-219ENST00000497960 ATMQ13315 3056 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 B8ZZF3 427 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 E7EQ34 232 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 NIPSNAP2O75323 286 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 CREG1O75629 220 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 RECKO95980 971 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 HBQ1P09105 142 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 PKMP14618 531 aaKnown RBP14.79□□□□□ -0.04
NUP50-219ENST00000497960 CD9P21926 228 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 TNFRSF8P28908 595 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 CCNFP41002 786 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 SLC1A2P43004 574 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 POLE2P56282 527 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 NFATC3Q12968 1075 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 CBLBQ13191 982 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 GPS2Q13227 327 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 ERV3-1Q14264 604 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 HSP90AA5PQ58FG0 334 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 PRAMEF17Q5VTA0 474 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 FAM199XQ6PEV8 388 aaPredicted RBP14.79□□□□□ -0.04
NUP50-219ENST00000497960 LMNTD2Q8IXW0 634 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 MAGEC3Q8TD91 643 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 APOBEC4Q8WW27 367 aaKnown RBP14.79□□□□□ -0.04
NUP50-219ENST00000497960 IL17FQ96PD4 163 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 TWSG1Q9GZX9 223 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 CHRNA10Q9GZZ6 450 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 CCDC68Q9H2F9 335 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 ACTR5Q9H9F9 607 aaPredicted RBP14.79□□□□□ -0.04
NUP50-219ENST00000497960 IARS2Q9NSE4 1012 aaKnown RBP14.79□□□□□ -0.04
NUP50-219ENST00000497960 CIDEBQ9UHD4 219 aa14.79□□□□□ -0.04
NUP50-219ENST00000497960 SMG1Q96Q15 3661 aaKnown RBP14.79□□□□□ -0.04
NUP50-219ENST00000497960 BAHCC1Q9P281 2608 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 CDC14CA4D256 554 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 MEN1O00255 615 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 RASGRF2O14827 1237 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 S1PR4O95977 384 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 ERVK-10P10266 1014 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 PTPN4P29074 926 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 ATP5DP30049 168 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 SSTR1P30872 391 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 BDKRB1P46663 353 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 KCNAB2Q13303 367 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 ATP1A1-AS1Q5TC04 95 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 TRMT10BQ6PF06 316 aaKnown RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 CNSTQ6PJW8 725 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 TAX1BP1Q86VP1 789 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 DENND6AQ8IWF6 608 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 DSELQ8IZU8 1212 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 C2orf73Q8N5S3 287 aaPredicted RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 ZBTB2Q8N680 514 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 SLC38A9Q8NBW4 561 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 OR2L8Q8NGY9 312 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 FLVCR1-AS1Q8TAF5 88 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 FAM136AQ96C01 138 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 FAM117AQ9C073 453 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 SLC25A18Q9H1K4 315 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 CHST8Q9H2A9 424 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 CDC42EP4Q9H3Q1 356 aaKnown RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 ACTL8Q9H568 366 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 AKIRIN1Q9H9L7 192 aaPredicted RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 PLAC1Q9HBJ0 212 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 FAM60AQ9NP50 221 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 STARD5Q9NSY2 213 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 INTS7Q9NVH2 962 aaKnown RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 IRAK4Q9NWZ3 460 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 ZFATQ9P243 1243 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 TUBD1Q9UJT1 453 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 POLHQ9Y253 713 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 FARSAQ9Y285 508 aaKnown RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 HEMK1Q9Y5R4 338 aaPredicted RBP14.78□□□□□ -0.04
NUP50-219ENST00000497960 NFS1Q9Y697 457 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 AP1M2Q9Y6Q5 423 aa14.78□□□□□ -0.04
NUP50-219ENST00000497960 KALRNO60229 2985 aa14.77□□□□□ -0.04
NUP50-219ENST00000497960 ZNF749O43361 778 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 OR2B3O76000 313 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 C1orf105O95561 183 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 GSTA2P09210 222 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 PEBP1P30086 187 aaKnown RBP14.77□□□□□ -0.05
NUP50-219ENST00000497960 STX2P32856 288 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 MPP1Q00013 466 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 MGAT5Q09328 741 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 CTBP1Q13363 440 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 GRB7Q14451 532 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 SLMAPQ14BN4 828 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 ZIC1Q15915 447 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 TTLL9Q3SXZ7 439 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 ZNF789Q5FWF6 425 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 ZNF517Q6ZMY9 492 aaPredicted RBP14.77□□□□□ -0.05
NUP50-219ENST00000497960 SYVN1Q86TM6 617 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 LINC01555Q8NAE3 123 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 CDKL2Q92772 493 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 MENTQ9BUN1 341 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 FBXO6Q9NRD1 293 aaPredicted RBP14.77□□□□□ -0.05
NUP50-219ENST00000497960 NINJ2Q9NZG7 142 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms