RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 GRIA3P42263 894 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 GRM7Q14831 915 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 FCRL6Q6DN72 434 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 TTC23LQ6PF05 361 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 FIGLAQ6QHK4 219 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 TMEM139Q8IV31 216 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 TMEM151BQ8IW70 566 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 RNF10Q8N5U6 811 aaKnown RBP17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 LKAAEAR1Q8TD35 194 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 IL17FQ96PD4 163 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 BARD1Q99728 777 aaKnown RBP17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 ZBTB20Q9HC78 741 aaPredicted RBP17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 CUTCQ9NTM9 273 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 IL1RAPL1Q9NZN1 696 aa17.49■□□□□ 0.39
ATPAF2-209ENST00000497871 TARM1B6A8C7 271 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 DSCR3O14972 297 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 PRICKLE3O43900 615 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 SRPX2O60687 465 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 APRTP07741 180 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 ITGAXP20702 1163 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 ITGA3P26006 1051 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 TTPAP49638 278 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 TMED2Q15363 201 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 NKG7Q16617 165 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 FAM214AQ32MH5 1076 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 PCID2Q5JVF3 399 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 SEL1L2Q5TEA6 688 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 LDB1Q86U70 411 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 SLC13A5Q86YT5 568 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 KRT222Q8N1A0 295 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 LMNTD1Q8N9Z9 388 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 PPHLN1Q8NEY8 458 aaKnown RBP17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 C1orf54Q8WWF1 131 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 INPP5DQ92835 1189 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 RAD51AP1Q96B01 352 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 ZNF285Q96NJ3 590 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 PANX3Q96QZ0 392 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 DESI2Q9BSY9 194 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 RAB11FIP5Q9BXF6 653 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 RBSNQ9H1K0 784 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 CHRAC1Q9NRG0 131 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 CATSPERZQ9NTU4 200 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 CIDEBQ9UHD4 219 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 ERRFI1Q9UJM3 462 aaPredicted RBP17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 CDC23Q9UJX2 597 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 CAPN6Q9Y6Q1 641 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 FER1L5A0AVI2 2057 aa17.48■□□□□ 0.39
ATPAF2-209ENST00000497871 HIVEP3Q5T1R4 2406 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 A1L4Q6 167 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 FITM1A5D6W6 292 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 ANKUB1A6NFN9 424 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 KPNA5O15131 536 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 CD3EAPO15446 510 aaKnown RBP17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 ETS1P14921 441 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 GLRBP48167 497 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 PRAMEF13Q5VWM6 474 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 PTRHD1Q6GMV3 140 aaKnown RBP17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 PRUNE1Q86TP1 453 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 CUZD1Q86UP6 607 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 TAX1BP1Q86VP1 789 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 GSDMBQ8TAX9 411 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 SPSB2Q99619 263 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 SELENOSQ9BQE4 189 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 P2RY12Q9H244 342 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 MRM3Q9HC36 420 aaKnown RBP17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 SLC6A20Q9NP91 592 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 PAK5Q9P286 719 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 MARCH4Q9P2E8 410 aaPredicted RBP17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 FBXL4Q9UKA2 621 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 NXT1Q9UKK6 140 aaKnown RBP17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 SLC5A6Q9Y289 635 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 PCDHGA10Q9Y5H3 936 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 MRFAP1Q9Y605 127 aa17.47■□□□□ 0.39
ATPAF2-209ENST00000497871 SOCS6O14544 535 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 LDLRP01130 860 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 MCM3P25205 808 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 ELOAQ14241 798 aaKnown RBP17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 AGAP7PQ5VUJ5 663 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 KIRREL2Q6UWL6 708 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 IGFL2Q6UWQ7 119 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 MAMDC2Q7Z304 686 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 LRRC6Q86X45 466 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 MPP5Q8N3R9 675 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 RAB42Q8N4Z0 105 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 CCDC89Q8N998 374 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 TTC29Q8NA56 475 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 HMGCLL1Q8TB92 370 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 VPS50Q96JG6 964 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 AGAP4Q96P64 663 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 WDR77Q9BQA1 342 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 AGPAT4Q9NRZ5 378 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 GNPTGQ9UJJ9 305 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 TTC7AQ9ULT0 858 aaPredicted RBP17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 KLK4Q9Y5K2 254 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 HS3ST3B1Q9Y662 390 aa17.46■□□□□ 0.39
ATPAF2-209ENST00000497871 DOPEY1Q5JWR5 2465 aa17.45■□□□□ 0.38
ATPAF2-209ENST00000497871 VSTM2BA6NLU5 285 aa17.45■□□□□ 0.38
ATPAF2-209ENST00000497871 C1orf105O95561 183 aa17.45■□□□□ 0.38
ATPAF2-209ENST00000497871 RPS3P23396 243 aaKnown RBP eCLIP17.45■□□□□ 0.38
ATPAF2-209ENST00000497871 SNX1Q13596 522 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms