RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 CXCL10P02778 98 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 OPN1MWP04001 364 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ALPPP05187 535 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ICAM1P05362 532 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 KRT8P05787 483 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 MMP3P08254 477 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CD63P08962 238 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 RAB40ALP0C0E4 278 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 OPN1MW2P0DN77 364 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 OPN1MW3P0DN78 364 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ALPPL2P10696 532 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CYP2A6P11509 494 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CD58P19256 250 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 BMP5P22003 454 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 EEF1B2P24534 225 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 HIBADHP31937 336 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CNR2P34972 360 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 RBMXP38159 391 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 COMPP49747 757 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CYP2J2P51589 502 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TKTL1P51854 596 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 LUMP51884 338 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF132P52740 706 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ATXN3P54252 364 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 PDE1AP54750 535 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TPD52P55327 224 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLDN15P56746 228 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 UBASH3AP57075 661 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC26A5P58743 744 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GMFBP60983 142 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ST8SIA6P61647 398 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 HNRNPKP61978 463 aaKnown RBP eCLIP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 HSF1Q00613 529 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 LRRC74AQ0VAA2 488 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRA2AQ13595 282 aaKnown RBP eCLIP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TP53BP2Q13625 1128 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GALNT3Q14435 633 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 DLG2Q15700 870 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 INAQ16352 499 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 DUSP6Q16828 381 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ESCO2Q56NI9 601 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 IGSF11Q5DX21 431 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM198Q66K66 360 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 HIST2H2BDQ6DRA6 164 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 AAGABQ6PD74 315 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TEX38Q6PEX7 206 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM270Q6UE05 265 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 LCTLQ6UWM7 567 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 C11orf57Q6ZUT1 292 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 C15orf52Q6ZUT6 534 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 COPS6Q7L5N1 327 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ADCK1Q86TW2 530 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 NOXA1Q86UR1 476 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 HOOK3Q86VS8 718 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 NRROSQ86YC3 692 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SFTPA2Q8IWL1 248 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 UEVLDQ8IX04 471 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 C4orf19Q8IY42 314 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GALNT16Q8N428 558 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 POU5F2Q8N7G0 328 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GMCL1P1Q8NEA9 526 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GJC3Q8NFK1 279 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 EXD1Q8NHP7 514 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 B4GALNT2Q8NHY0 566 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CTCFLQ8NI51 663 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TEKT4Q8WW24 435 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CAVIN3Q969G5 261 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC25A28Q96A46 364 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLDN23Q96B33 292 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPSB1Q96BD6 273 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 MOCOSQ96EN8 888 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 C14orf79Q96F83 325 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 FCRL5Q96RD9 977 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 BBS4Q96RK4 519 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GAL3ST4Q96RP7 486 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SMC6Q96SB8 1091 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 FEVQ99581 238 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDCA3Q99618 268 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GFI1Q99684 422 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 AIFM2Q9BRQ8 373 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 WDR83Q9BRX9 315 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 PIMREGQ9BSJ6 248 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 EDEM2Q9BV94 578 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 MRIQ9BWK5 157 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CACNG6Q9BXT2 260 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPRY4Q9C004 299 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CIPCQ9C0C6 399 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 MVB12BQ9H7P6 319 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 LIN28AQ9H9Z2 209 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPAG4Q9NPE6 437 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 POLE3Q9NRF9 147 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 PAPOLBQ9NRJ5 636 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARL8BQ9NVJ2 186 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 RPH3AQ9Y2J0 694 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 HEMK1Q9Y5R4 338 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 IKBKGQ9Y6K9 419 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SIPA1L3O60292 1781 aaPredicted RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 MICAL3Q7RTP6 2002 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF236Q9UL36 1845 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GON4LQ3T8J9 2241 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms