RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 IGHV4-61A0A0C4DH41 118 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 A0A0G2JLW4 131 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 CASTOR2A6NHX0 329 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 ENO4A6NNW6 628 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 NGFP01138 241 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 IGHV4-59P01825 116 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 SP1P08047 785 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 IGHV4-31P0DP07 118 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 IRF2P14316 349 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 GLULP15104 373 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 PDGFRAP16234 1089 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 TCEA1P23193 301 aaKnown RBP4.34□□□□□ -1.71
VPS36-206ENST00000497149 CDKN1AP38936 164 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 ALDH3A2P51648 485 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 ROR1Q01973 937 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 PPARDQ03181 441 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 NPTX1Q15818 432 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 XKR3Q5GH77 459 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 DCLRE1AQ6PJP8 1040 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 C11orf57Q6ZUT1 292 aaPredicted RBP4.34□□□□□ -1.71
VPS36-206ENST00000497149 USP43Q70EL4 1123 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 GALNTL5Q7Z4T8 443 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 ABI3BPQ7Z7G0 1075 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 MMD2Q8IY49 270 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 LGI2Q8N0V4 545 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 OR4K1Q8NGD4 311 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 OR52N5Q8NH56 324 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 VANGL1Q8TAA9 524 aaPredicted RBP4.34□□□□□ -1.71
VPS36-206ENST00000497149 FAM71F1Q96KD3 344 aaPredicted RBP4.34□□□□□ -1.71
VPS36-206ENST00000497149 FN3KQ9H479 309 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 SH3GLB2Q9NR46 395 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 CHCHD3Q9NX63 227 aaKnown RBP4.34□□□□□ -1.71
VPS36-206ENST00000497149 TXNDC16Q9P2K2 825 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 KCNJ14Q9UNX9 436 aa4.34□□□□□ -1.71
VPS36-206ENST00000497149 WDR81Q562E7 1941 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 A0A087WV48 116 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 A0A087WYN8 130 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 A0A1W2PRQ8 180 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 C2orf81A6NN90 581 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 BLOC1S5-TXNDC5H3BN57 136 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 EDN1P05305 212 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 PLA2G4BP0C869 781 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 TCF4P15884 667 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 CDH3P22223 829 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 HOXC13P31276 330 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 CAPZA1P52907 286 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 CLDN15P56746 228 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 TUBB4BP68371 445 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 DLK1P80370 383 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 GPR17Q13304 367 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 P2RY6Q15077 328 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 KRTAP24-1Q3LI83 254 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 C20orf194Q5TEA3 1177 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 GLRX5Q86SX6 157 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 CNBD1Q8NA66 436 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 GRAPLQ8TC17 118 aaPredicted RBP4.33□□□□□ -1.72
VPS36-206ENST00000497149 PROX1Q92786 737 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 HES6Q96HZ4 224 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 FERMT1Q9BQL6 677 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 PRRG4Q9BZD6 226 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 TLE6Q9H808 572 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 XAB2Q9HCS7 855 aaKnown RBP4.33□□□□□ -1.72
VPS36-206ENST00000497149 SLC52A3Q9NQ40 469 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 INTS9Q9NV88 658 aaKnown RBP4.33□□□□□ -1.72
VPS36-206ENST00000497149 STUB1Q9UNE7 303 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 SNX7Q9UNH6 387 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 C2CD2Q9Y426 696 aa4.33□□□□□ -1.72
VPS36-206ENST00000497149 TRAV24A0A0B4J272 114 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 ARHGEF37A1IGU5 675 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 ARPC2O15144 300 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 WDR46O15213 610 aaKnown RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 ATP6AP2O75787 350 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 NADKO95544 446 aaPredicted RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 GSRP00390 522 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 AMBPP02760 352 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 CD48P09326 243 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 PRSS56P0CW18 603 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 ACAT1P24752 427 aaKnown RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 HSD17B3P37058 310 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 CRKLP46109 303 aaKnown RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 NAGLUP54802 743 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 HERV-K104P61576 105 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 KLC1Q07866 573 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 HERC3Q15034 1050 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 PHKG1Q16816 387 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 CAVIN1Q6NZI2 390 aaKnown RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 ENPP7Q6UWV6 458 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 SLC16A9Q7RTY1 509 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 ANKRD23Q86SG2 305 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 PIGZQ86VD9 579 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 NDUFAF2Q8N183 169 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 RYBPQ8N488 228 aaPredicted RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 RASGEF1AQ8N9B8 481 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 OCC1Q8TAD7 63 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 DEPDC1BQ8WUY9 529 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 KCNE4Q8WWG9 221 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 SPATA33Q96N06 139 aa4.32□□□□□ -1.72
VPS36-206ENST00000497149 GTPBP2Q9BX10 602 aaKnown RBP4.32□□□□□ -1.72
VPS36-206ENST00000497149 PANK2Q9BZ23 570 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms