RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 VTNP04004 478 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 RBMS1P29558 406 aaKnown RBP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 GCH1P30793 250 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 RXRGP48443 463 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 NRIP1P48552 1158 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 CYCSP99999 105 aaKnown RBP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 MS4A2Q01362 244 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 GCNT1Q02742 428 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 ZNF415Q09FC8 603 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 LMOD3Q0VAK6 560 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 CALCOCO2Q13137 446 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 RIGQ13278 110 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 FASTKD3Q14CZ7 662 aaKnown RBP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 LYSMD4Q5XG99 296 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 SZRD1Q7Z422 152 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 C17orf53Q8N3J3 647 aaPredicted RBP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 GUF1Q8N442 669 aaKnown RBP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 TEX19Q8NA77 164 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 GPRC5AQ8NFJ5 357 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 OR13C3Q8NGS6 347 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 OR1L3Q8NH93 324 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 ZNF486Q96H40 463 aaPredicted RBP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 NECTIN4Q96NY8 510 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 MS4A10Q96PG2 267 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 Q9N2K0 584 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.72□□□□□ -1.97
VPS26A-208ENST00000497022 TNNQ9UQP3 1299 aa2.72□□□□□ -1.97
VPS26A-208ENST00000497022 LOC100509620A0A075B734 347 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 LOC102723996A0A087X1L8 192 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 GPR75-ASB3A0A0A6YYF3 556 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 A0A1W2PPR1 153 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 C2orf81A6NN90 581 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 EPHB6O15197 1021 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 BCL10O95999 233 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 SMIM18P0DKX4 95 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 CAPN2P17655 700 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 PRKACGP22612 351 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 JAK1P23458 1154 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 PTPN3P26045 913 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 HOXD13P35453 343 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 MAT1AQ00266 395 aaKnown RBP2.71□□□□□ -1.98
VPS26A-208ENST00000497022 PCLAFQ15004 111 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 CA9Q16790 459 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 C15orf59Q2T9L4 293 aaPredicted RBP2.71□□□□□ -1.98
VPS26A-208ENST00000497022 SYT14P1Q58G82 188 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 LCN1P1Q5VSP4 162 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 G2E3Q7L622 706 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 RPAP2Q8IXW5 612 aaPredicted RBP2.71□□□□□ -1.98
VPS26A-208ENST00000497022 MCUQ8NE86 351 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 OR6S1Q8NH40 331 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 MAPK15Q8TD08 544 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 SSMEM1Q8WWF3 244 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 TIGD1Q96MW7 591 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 TREX2Q9BQ50 279 aaPredicted RBP2.71□□□□□ -1.98
VPS26A-208ENST00000497022 SOSTQ9BQB4 213 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 TRIM6Q9C030 488 aaPredicted RBP2.71□□□□□ -1.98
VPS26A-208ENST00000497022 THAP2Q9H0W7 228 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 WNT5BQ9H1J7 359 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 ZHX3Q9H4I2 956 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 GKN1Q9NS71 199 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 FAM207AQ9NSI2 230 aaPredicted RBP2.71□□□□□ -1.98
VPS26A-208ENST00000497022 MUTYHQ9UIF7 546 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 STUB1Q9UNE7 303 aa2.71□□□□□ -1.98
VPS26A-208ENST00000497022 RSF1Q96T23 1441 aaPredicted RBP2.7□□□□□ -1.98
VPS26A-208ENST00000497022 A0A1W2PR80 420 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 MEIS2O14770 477 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 TOMM70O94826 608 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 C22orf31O95567 290 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 SLC2A2P11168 524 aaPredicted RBP2.7□□□□□ -1.98
VPS26A-208ENST00000497022 DARSP14868 501 aaKnown RBP2.7□□□□□ -1.98
VPS26A-208ENST00000497022 LHCGRP22888 699 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 CSTF2P33240 577 aaKnown RBP eCLIP2.7□□□□□ -1.98
VPS26A-208ENST00000497022 PTGER3P43115 390 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 PGFP49763 221 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 CDH13P55290 713 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 CSNK2BP67870 215 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 COX10Q12887 443 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 LY6DQ14210 128 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 MOGAT2Q3SYC2 334 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 TMEM211Q6ICI0 200 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 C11orf63Q6NUN7 778 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 UGT3A1Q6NUS8 523 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 C4orf50Q6ZRC1 276 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 TMPRSS11BQ86T26 416 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 Q8NBF4 154 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 NUP37Q8NFH4 326 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 GATAD1Q8WUU5 269 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 LPGAT1Q92604 370 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 RASL10AQ92737 203 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 ARSGQ96EG1 525 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 PRICKLE1Q96MT3 831 aaPredicted RBP2.7□□□□□ -1.98
VPS26A-208ENST00000497022 TEX12Q9BXU0 123 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 FAM49AQ9H0Q0 323 aaPredicted RBP2.7□□□□□ -1.98
VPS26A-208ENST00000497022 GHITMQ9H3K2 345 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 OPA3Q9H6K4 179 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 PANK3Q9H999 370 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 TRPV4Q9HBA0 871 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 EQTNQ9NQ60 294 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 SLC35C2Q9NQQ7 365 aa2.7□□□□□ -1.98
VPS26A-208ENST00000497022 HAUS2Q9NVX0 235 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms