RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 MED8Q96G25 268 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 SGPP1Q9BX95 441 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 TBC1D10AQ9BXI6 508 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 TWSG1Q9GZX9 223 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 SRMSQ9H3Y6 488 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 ACSS2Q9NR19 701 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 LRIT1Q9P2V4 623 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 PCTPQ9UKL6 214 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 PADI4Q9UM07 663 aa17.69■□□□□ 0.42
RGP1-202ENST00000496906 GOLGA4Q13439 2230 aaKnown RBP17.69■□□□□ 0.42
RGP1-202ENST00000496906 EP300Q09472 2414 aaPredicted RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 A0A1W2PPV9 198 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 RHPN2P1A8MT19 583 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 E2F3O00716 465 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 FOXD2O60548 495 aaPredicted RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 CCNT2O60583 730 aaKnown RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 CD59P13987 128 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 NR1D2Q14995 579 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 CAPN13Q6MZZ7 669 aaPredicted RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 SUSD1Q6UWL2 747 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 C2orf73Q8N5S3 287 aaPredicted RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 CKAP2Q8WWK9 683 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 SMPDL3AQ92484 453 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 SLC38A3Q99624 504 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 PITPNM3Q9BZ71 974 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 SLC32A1Q9H598 525 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 CCDC177Q9NQR7 707 aaPredicted RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 INTS7Q9NVH2 962 aaKnown RBP17.68■□□□□ 0.42
RGP1-202ENST00000496906 OPTCQ9UBM4 332 aa17.68■□□□□ 0.42
RGP1-202ENST00000496906 RIF1Q5UIP0 2472 aaKnown RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 K7EPI3 171 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 BTN3A3O00478 584 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 H2AFYO75367 372 aaKnown RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 SUPT7LO94864 414 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 WDR47O94967 919 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 SERPINE1P05121 402 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 NEFHP12036 1026 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 CCND1P24385 295 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 MDH1P40925 334 aaKnown RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 GYS2P54840 703 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 GUCY1A3Q02108 690 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 CES4AQ5XG92 561 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 RPS27LQ71UM5 84 aaKnown RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 ASCL5Q7RTU5 278 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 THOC6Q86W42 341 aaKnown RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 ADGRF3Q8IZF5 1079 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 CCNYL1Q8N7R7 359 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 OR6C4Q8NGE1 309 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 PPP1R14CQ8TAE6 165 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 RAB3IL1Q8TBN0 382 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 ZNF483Q8TF39 744 aaPredicted RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 NSUN5Q96P11 429 aaKnown RBP17.67■□□□□ 0.42
RGP1-202ENST00000496906 GSTO2Q9H4Y5 243 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 SLC22A14Q9Y267 594 aa17.67■□□□□ 0.42
RGP1-202ENST00000496906 EME2A4GXA9 379 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 POLR3GO15318 223 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 CHRM5P08912 532 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 CKMT1AP12532 417 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 PEBP1P30086 187 aaKnown RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 EPHA4P54764 986 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 TSTA3Q13630 321 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 GUSBP11Q6P575 273 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 TRIM42Q8IWZ5 723 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 MAGEB18Q96M61 343 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 OR4K3Q96R72 315 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 MANSC1Q9H8J5 431 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 ZBTB26Q9HCK0 441 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 DNAJC11Q9NVH1 559 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 ZFHX2Q9C0A1 2572 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 WDR87Q6ZQQ6 2873 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 OR6C74A6NCV1 312 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 C4orf47A7E2U8 309 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 KLF11O14901 512 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 PRICKLE3O43900 615 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 GDF9O60383 454 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 UBXN7O94888 489 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 PNLIPP16233 465 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 GRK2P25098 689 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 GPR3P46089 330 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 CDH13P55290 713 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 NAA20P61599 178 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 CLCQ05315 142 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 GTF2H2Q13888 395 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 CFAP157Q5JU67 520 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 PRAMEF13Q5VWM6 474 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 GTF2H2CQ6P1K8 395 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 FRMD7Q6ZUT3 714 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 GOLGA7Q7Z5G4 137 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 MTERF4Q7Z6M4 381 aaKnown RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 TEX9Q8N6V9 391 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 PPP4R1Q8TF05 950 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 SETD7Q8WTS6 366 aaKnown RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 ZNF75CPQ92670 426 aaPredicted RBP17.66■□□□□ 0.42
RGP1-202ENST00000496906 RSC1A1Q92681 617 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 CCDC74AQ96AQ1 378 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 ABCF3Q9NUQ8 709 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 SPHK1Q9NYA1 384 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 OGFRQ9NZT2 677 aa17.66■□□□□ 0.42
RGP1-202ENST00000496906 FAM186AA6NE01 2351 aa17.65■□□□□ 0.42
RGP1-202ENST00000496906 PIPSLA2A3N6 862 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms