RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 DLGAP1O14490 977 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 EI24O14681 340 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 GSTA4O15217 222 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 PRAMEF4O60810 478 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 SDC1P18827 310 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 S100A3P33764 101 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 CTSCP53634 463 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 GRIN2CQ14957 1233 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 ADRM1Q16186 407 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 RUNDC3AQ59EK9 446 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 PRAMEF9Q5VWM5 478 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 LIPJQ5W064 366 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 RIMKLAQ8IXN7 391 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 NRSN1Q8IZ57 195 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 OR10A6Q8NH74 314 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 ATL1Q8WXF7 558 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 HERVK_113Q902F9 699 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 RMND5BQ96G75 393 aaPredicted RBP12.69□□□□□ -0.38
GARNL3-220ENST00000496711 VPS50Q96JG6 964 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 LRRC3BQ96PB8 259 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 THUMPD3Q9BV44 507 aaKnown RBP12.69□□□□□ -0.38
GARNL3-220ENST00000496711 CHID1Q9BWS9 393 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 GRIP2Q9C0E4 1043 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 KCNH6Q9H252 994 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 IKZF5Q9H5V7 419 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 RMND5AQ9H871 391 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 GORASP2Q9H8Y8 452 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 SLC24A3Q9HC58 644 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 DPP7Q9UHL4 492 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 ITM2BQ9Y287 266 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 MAN2B2Q9Y2E5 1009 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 MYRFQ9Y2G1 1151 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 SLC27A6Q9Y2P4 619 aa12.69□□□□□ -0.38
GARNL3-220ENST00000496711 A0A096LPI6 279 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PLOD2O00469 737 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 KPNA3O00505 521 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 WNT9AO14904 365 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 AREL1O15033 823 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ERN1O75460 977 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 H6PDO95479 791 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 MT-ND1P03886 318 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 CATP04040 527 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PRNPP04156 253 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 RAP2AP10114 183 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 GSTT1P30711 240 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 MAPK9P45984 424 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 IRF8Q02556 426 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF33BQ06732 778 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 MERTKQ12866 999 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 CSTF3Q12996 717 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 NADK2Q4G0N4 442 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 FAM98BQ52LJ0 330 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 LRIF1Q5T3J3 769 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 SLC30A9Q6PML9 568 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 METTL25Q8N6Q8 603 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 FAM47BQ8NA70 645 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 NCSTNQ92542 709 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 FIG4Q92562 907 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 TESCQ96BS2 214 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 APIPQ96GX9 242 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 TSSK3Q96PN8 268 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 CCM2Q9BSQ5 444 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 HAUS8Q9BT25 410 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 BDH2Q9BUT1 245 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 OSBPL6Q9BZF3 934 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PAIP1Q9H074 479 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PAPOLBQ9NRJ5 636 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF639Q9UID6 485 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 SLC5A10A0PJK1 596 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 FAM220BPB1ANY3 271 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 H0Y858 1186 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 H3BNH8 94 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PER2O15055 1255 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 OR6B1O95007 311 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ZNF23P17027 643 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 AMD1P17707 334 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 MYF6P23409 242 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 BDKRB1P46663 353 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PREPP48147 710 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 NR1H2P55055 460 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 CHRNB3Q05901 458 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 TMEM115Q12893 351 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ABRQ12979 859 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 GTDC1Q4AE62 458 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PYCR3Q53H96 274 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ATG9BQ674R7 924 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 MSANTD1Q6ZTZ1 278 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 THOC6Q86W42 341 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 KLHDC8AQ8IYD2 350 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 GALNT15Q8N3T1 639 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 TMEM132CQ8N3T6 1108 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 TSPAN14Q8NG11 270 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 RSPRY1Q96DX4 576 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 ITCHQ96J02 903 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 FCRL1Q96LA6 429 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 APOLD1Q96LR9 279 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 CCDC138Q96M89 665 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms