RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	HMGCLL1	Q8TB92	370 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	MZB1	Q8WU39	189 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.51	□□□□□ -0.57
APTX-233	ENST00000496030	ANKRD7	Q92527	254 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	MED8	Q96G25	268 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	AHCYL2	Q96HN2	611 aa	Known RBP	11.51	□□□□□ -0.57
APTX-233	ENST00000496030	PPM1M	Q96MI6	270 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	FOPNL	Q96NB1	174 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	DPYSL5	Q9BPU6	564 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	SYTL2	Q9HCH5	934 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	SNX15	Q9NRS6	342 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	IGSF5	Q9NSI5	407 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	EURL	Q9NYK6	297 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	OR6C2	Q9NZP2	312 aa		11.51	□□□□□ -0.57
APTX-233	ENST00000496030	TLN1	Q9Y490	2541 aa	Known RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030		A0A1W2PPV9	198 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	TRIM49D1	C9J1S8	452 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CTIF	O43310	598 aa	Known RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	ZBTB14	O43829	449 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	RFPL1	O75677	317 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CAT	P04040	527 aa	Known RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	C8G	P07360	202 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CHRM5	P08912	532 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	NUDT17	P0C025	328 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CCDC166	P0CW27	439 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CD1D	P15813	335 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CRABP2	P29373	138 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	KPNA2	P52292	529 aa	Known RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	SLC12A2	P55011	1212 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	INHBC	P55103	352 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	C16orf72	Q14CZ0	275 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	MAP9	Q49MG5	647 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	KIAA1614	Q5VZ46	1190 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	KLHL35	Q6PF15	583 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	TIFAB	Q6ZNK6	161 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CENPL	Q8N0S6	344 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	MYO1H	Q8N1T3	1032 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	OR2W6P	Q8NHA6	318 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	ZNF480	Q8WV37	535 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	CCDC74B	Q96LY2	380 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	GPR78	Q96P69	363 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	TGM7	Q96PF1	710 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	DEPDC7	Q96QD5	511 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	OR2A14	Q96R47	310 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	UNK	Q9C0B0	810 aa	Known RBP	11.5	□□□□□ -0.57
APTX-233	ENST00000496030	DERL2	Q9GZP9	239 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	PARVB	Q9HBI1	364 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	POMT2	Q9UKY4	750 aa		11.5	□□□□□ -0.57
APTX-233	ENST00000496030	IGHV5-51	A0A0C4DH38	117 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	NPEPPSL1	A6NEC2	478 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030		E7ENX8	843 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TOX3	O15405	576 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	KRT38	O76015	456 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	SLC16A8	O95907	504 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	SNRPA	P09012	282 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	ANKRD34C	P0C6C1	535 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	CNTF	P26441	200 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	PRDX3	P30048	256 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	SLC26A3	P40879	764 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	PCBP4	P57723	403 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	IRF9	Q00978	393 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TAP2	Q03519	686 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	SP140	Q13342	867 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	FASTK	Q14296	549 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	RASA2	Q15283	850 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	OR4D1	Q15615	310 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TSN	Q15631	228 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	BROX	Q5VW32	411 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	IRGC	Q6NXR0	463 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TTC23L	Q6PF05	361 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	FBXO38	Q6PIJ6	1188 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	MBOAT1	Q6ZNC8	495 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	FAM92B	Q6ZTR7	304 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	PRSS42	Q7Z5A4	293 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	ISCA2	Q86U28	154 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	OOSP2	Q86WS3	158 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TDRP	Q86YL5	185 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	CYP4X1	Q8N118	509 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	RCBTB1	Q8NDN9	531 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	MAGEC3	Q8TD91	643 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	MCOLN3	Q8TDD5	553 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	SNRNP27	Q8WVK2	155 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	KLHL6	Q8WZ60	621 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	PTER	Q96BW5	349 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	GRAMD1A	Q96CP6	724 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	ZDHHC12	Q96GR4	267 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	LIN37	Q96GY3	246 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	PRR11	Q96HE9	360 aa	Predicted RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	TMEM74	Q96NL1	305 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	MAP3K3	Q99759	626 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	PITPNM3	Q9BZ71	974 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	ACTR10	Q9NZ32	417 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	SPATA7	Q9P0W8	599 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	CTNNAL1	Q9UBT7	734 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	NOVA2	Q9UNW9	492 aa	Known RBP	11.49	□□□□□ -0.57
APTX-233	ENST00000496030	ACOT9	Q9Y305	439 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	IKBKG	Q9Y6K9	419 aa		11.49	□□□□□ -0.57
APTX-233	ENST00000496030	NOTCH2	Q04721	2471 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms