RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 JTBO76095 146 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 SERPING1P05155 500 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 PAEPP09466 180 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 PDGFRAP16234 1089 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 CHRNB2P17787 502 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 DGKAP23743 735 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 NNMTP40261 264 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 PLK1P53350 603 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 TAS2R38P59533 333 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 PITX1P78337 314 aaPredicted RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 CNTN1Q12860 1018 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 ELAVL3Q14576 367 aaKnown RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 TAF1BQ53T94 588 aaPredicted RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 TDRD12Q587J7 1177 aaKnown RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 GRHL2Q6ISB3 625 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 TRIM72Q6ZMU5 477 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 ZNF571Q7Z3V5 609 aaPredicted RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 TAC4Q86UU9 113 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 IQCHQ86VS3 1027 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 CHSY1Q86X52 802 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 TMTC1Q8IUR5 882 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 ZNF248Q8NDW4 579 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 SUN3Q8TAQ9 357 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 SLC20A1Q8WUM9 679 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 KLK6Q92876 244 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 FAM149B1Q96BN6 582 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 REPS1Q96D71 796 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 ALG14Q96F25 216 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 TMEM41AQ96HV5 264 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 HIC2Q96JB3 615 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 SERPINB11Q96P15 392 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 LGMNQ99538 433 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 BAG1Q99933 345 aaPredicted RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 CRB3Q9BUF7 120 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.45□□□□□ -1.38
VIM-207ENST00000495528 SEMA4CQ9C0C4 833 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 PDCL3Q9H2J4 239 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 NHEJ1Q9H9Q4 299 aaPredicted RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 TRIM36Q9NQ86 728 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 SNX15Q9NRS6 342 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 SEPT11Q9NVA2 429 aaKnown RBP6.45□□□□□ -1.38
VIM-207ENST00000495528 PLXNA2O75051 1894 aa6.45□□□□□ -1.38
VIM-207ENST00000495528 A0A1B0GVM2 712 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 TMCO5BA8MYB1 307 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 F5H5T6 163 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 PRAMEF26H0Y7S4 382 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 M0R3H8 397 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 RNF103O00237 685 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 MCF2LO15068 1137 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 SLC31A1O15431 190 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 FFAR2O15552 330 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 SUV39H1O43463 412 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 TMPRSS11DO60235 418 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 USP12O75317 370 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 TRUB2O95900 331 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 NHLRC4P0CG21 123 aaPredicted RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 THEGLP0DJG4 465 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 CYP11B1P15538 503 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 HNRNPH3P31942 346 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 NUDT1P36639 197 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 PRKCIP41743 596 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 GPD2P43304 727 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 RPL34P49207 117 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 NANOS3P60323 173 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 HOXA4Q00056 320 aaPredicted RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 SULT2A1Q06520 285 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 OVGP1Q12889 678 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 EIF4EBP2Q13542 120 aaPredicted RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 SLC12A1Q13621 1099 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 LY6DQ14210 128 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 CLCA4Q14CN2 919 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 P3H1Q32P28 736 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 ACCSLQ4AC99 568 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 FAM46CQ5VWP2 391 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 TRIM69Q86WT6 500 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 CCAR2Q8N163 923 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 OR52K2Q8NGK3 314 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 OR4C6Q8NH72 309 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 OR8D1Q8WZ84 308 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 CCDC42Q96M95 316 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 ZNF578Q96N58 590 aaPredicted RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 PCDHB18PQ96TA0 734 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 PRMT1Q99873 361 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 WDR12Q9GZL7 423 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 USP29Q9HBJ7 922 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 FZD3Q9NPG1 666 aa6.44□□□□□ -1.38
VIM-207ENST00000495528 BZW2Q9Y6E2 419 aaKnown RBP6.44□□□□□ -1.38
VIM-207ENST00000495528 ZNF462Q96JM2 2506 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 A0A087X0T9 212 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 LY6G6EA0A0G2JKS1 128 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 AQP12BA6NM10 295 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 A8MVJ9 347 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 KCNU1A8MYU2 1149 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 KLK10O43240 276 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 MED7O43513 233 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 CSO75390 466 aaKnown RBP6.43□□□□□ -1.38
VIM-207ENST00000495528 NEBLO76041 1014 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 USP1O94782 785 aa6.43□□□□□ -1.38
VIM-207ENST00000495528 VIPP01282 170 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms