RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 IL11RAQ14626 422 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 TBC1D25Q3MII6 688 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 TAF1BQ53T94 588 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 WDR93Q6P2C0 686 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 TMEM207Q6UWW9 146 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 ADAMTSL2Q86TH1 951 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 CNPY4Q8N129 248 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 DENND1AQ8TEH3 1009 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 ATL1Q8WXF7 558 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 ZCCHC14Q8WYQ9 949 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 FGF11Q92914 225 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 PRR11Q96HE9 360 aaPredicted RBP11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 SLC41A2Q96JW4 573 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 PPM1MQ96MI6 270 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 TEFMQ96QE5 360 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 ZPBPQ9BS86 351 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 DDA1Q9BW61 102 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 PITPNM3Q9BZ71 974 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 TXLNGYQ9BZA5 131 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 DERL2Q9GZP9 239 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 KLHL25Q9H0H3 589 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 DKK4Q9UBT3 224 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 ZNF180Q9UJW8 692 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 ACOT9Q9Y305 439 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 PCDHGA7Q9Y5G6 932 aa11.67□□□□□ -0.54
CSNK1E-213ENST00000495232 A0A087X1B8 175 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 NPEPPSL1A6NEC2 478 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CDC7O00311 574 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CCNDBP1O95273 360 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 GUCA1CO95843 209 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 EBLN1P0CF75 366 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ERGP11308 486 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 PVRP15151 417 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ST6GAL1P15907 406 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CD82P27701 267 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CMPK1P30085 196 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 PEBP1P30086 187 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 SLC5A2P31639 672 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 PCBP4P57723 403 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 SH3BP2P78314 561 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 TUBB3Q13509 450 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 FASTKQ14296 549 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CSHL1Q14406 222 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 KCNAB1Q14722 419 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 NAA25Q14CX7 972 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ZKSCAN8Q15776 578 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 EMBQ6PCB8 327 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 SUSD1Q6UWL2 747 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CMC1Q7Z7K0 106 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 TRIM73Q86UV7 250 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 BPHLQ86WA6 291 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 PPP1R3BQ86XI6 285 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 RASGRP3Q8IV61 690 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 D2HGDHQ8N465 521 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 BMPERQ8N8U9 685 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 C19orf47Q8N9M1 422 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 LMNTD1Q8N9Z9 388 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 PPFIBP2Q8ND30 876 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ZNF480Q8WV37 535 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ANKRD49Q8WVL7 239 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 DLG3Q92796 817 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ALKBH8Q96BT7 664 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 MED8Q96G25 268 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 TCTN2Q96GX1 697 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 TRAPPC9Q96Q05 1148 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 MIPEPQ99797 713 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 EGFL8Q99944 293 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ACAT2Q9BWD1 397 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 B3GNT4Q9C0J1 378 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 NMRAL1Q9HBL8 299 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 ASCL3Q9NQ33 180 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 CCDC177Q9NQR7 707 aaPredicted RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 SNX15Q9NRS6 342 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 UTP6Q9NYH9 597 aaKnown RBP11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 RARRES3Q9UL19 164 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 BTRCQ9Y297 605 aa11.66□□□□□ -0.54
CSNK1E-213ENST00000495232 A0A096LPK6 155 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 IQANK1A0A1B0GTG1 560 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 CDRT15L2A8MXV6 281 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 RRP8O43159 456 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 PRAMEF10O60809 474 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 ANXA5P08758 320 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 SNRPAP09012 282 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 LTA4HP09960 611 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 SLC35E2BP0CK96 405 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 FOLR1P15328 257 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 CCND1P24385 295 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 IMPA1P29218 277 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 SLC26A3P40879 764 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 TSNQ15631 228 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 PHKG1Q16816 387 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 FAM83EQ2M2I3 478 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 KLC3Q6P597 504 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 AGTRAPQ6RW13 159 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 SBSNQ6UWP8 590 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 MBOAT1Q6ZNC8 495 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms