RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 NELL1Q92832 810 aa13.12□□□□□ -0.31
GPC1-209ENST00000495100 ARMC5Q96C12 935 aa13.12□□□□□ -0.31
GPC1-209ENST00000495100 DTNBP1Q96EV8 351 aa13.12□□□□□ -0.31
GPC1-209ENST00000495100 PKMYT1Q99640 499 aa13.12□□□□□ -0.31
GPC1-209ENST00000495100 RIOK2Q9BVS4 552 aaKnown RBP13.12□□□□□ -0.31
GPC1-209ENST00000495100 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.31
GPC1-209ENST00000495100 PADI4Q9UM07 663 aa13.12□□□□□ -0.31
GPC1-209ENST00000495100 DHRS7Q9Y394 339 aa13.12□□□□□ -0.31
GPC1-209ENST00000495100 SPEGQ15772 3267 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 H3BN98 237 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 RTCAO00442 366 aaKnown RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 MANBAO00462 879 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 SLC22A2O15244 555 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 RPS17P08708 135 aaKnown RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 HOXD10P28358 340 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 CDH12P55289 794 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 EPS8Q12929 822 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 NKG7Q16617 165 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 CYP2A13Q16696 494 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 SETMARQ53H47 684 aaPredicted RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ERI1Q8IV48 349 aaKnown RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 STK40Q8N2I9 435 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 IL4I1Q96RQ9 567 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 CLSTN3Q9BQT9 956 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 YIPF4Q9BSR8 244 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 NPLQ9BXD5 320 aaPredicted RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 RMND5AQ9H871 391 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 REEP1Q9H902 201 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ZNF334Q9HCZ1 680 aaPredicted RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 C3orf18Q9UK00 162 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 SLC45A1Q9Y2W3 748 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 PCDHA9Q9Y5H5 950 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 BRCA1P38398 1863 aaKnown RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 TMEM202A6NGA9 273 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 CLIC1O00299 241 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ANXA4P09525 319 aaPredicted RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 ALOX12P18054 663 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 DGKKQ5KSL6 1271 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 TNFAIP8L2Q6P589 184 aaPredicted RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 USP45Q70EL2 814 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 OLIG3Q7RTU3 272 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ZFAND4Q86XD8 727 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 FAM20CQ8IXL6 584 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 RHEBL1Q8TAI7 183 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 RNF31Q96EP0 1072 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 SEZ6LQ9BYH1 1024 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 ANKRD60Q9BZ19 345 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 AASDHPPTQ9NRN7 309 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 TRPC4Q9UBN4 977 aa13.11□□□□□ -0.31
GPC1-209ENST00000495100 FAM32AQ9Y421 112 aaKnown RBP13.11□□□□□ -0.31
GPC1-209ENST00000495100 BMP2P12643 396 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 ACPPP15309 386 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 MXD1Q05195 221 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 PON2Q15165 354 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 NEK10Q6ZWH5 1172 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 BTLAQ7Z6A9 289 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 TCF25Q9BQ70 676 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 HEPHQ9BQS7 1158 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CHCHD6Q9BRQ6 235 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 PLGRKTQ9HBL7 147 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 NUDT4Q9NZJ9 180 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 ANKDD1BA6NHY2 528 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CAPN15O75808 1086 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 RASAL1O95294 804 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 SOX14O95416 240 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 ALDH1A1P00352 501 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 TPP2P29144 1249 aaPredicted RBP13.1□□□□□ -0.31
GPC1-209ENST00000495100 MC1RQ01726 317 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 DSC1Q08554 894 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CD300CQ08708 224 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 MED22Q15528 200 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 GPRC6AQ5T6X5 926 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 TTC23Q5W5X9 447 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 ELMOD1Q8N336 334 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 PROX1Q92786 737 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 TSPAN18Q96SJ8 248 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 SACM1LQ9NTJ5 587 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 ABCG2Q9UNQ0 655 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 GLOD5A6NK44 160 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CXCL14O95715 111 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CCR7P32248 378 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 BMXP51813 675 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 SNRPD1P62314 119 aaKnown RBP13.1□□□□□ -0.31
GPC1-209ENST00000495100 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 ZNF284Q2VY69 593 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 SOWAHCQ53LP3 525 aaPredicted RBP13.1□□□□□ -0.31
GPC1-209ENST00000495100 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.1□□□□□ -0.31
GPC1-209ENST00000495100 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
GPC1-209ENST00000495100 SBSNQ6UWP8 590 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 TMEM179BQ7Z7N9 219 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 CEP19Q96LK0 163 aa13.1□□□□□ -0.31
GPC1-209ENST00000495100 MACROD1Q9BQ69 325 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms