RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-208	ENST00000494728	ZNF662	Q6ZS27	426 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	AGGF1	Q8N302	714 aa	eCLIP	11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	METTL27	Q8N6F8	245 aa	Predicted RBP	11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	OR2Y1	Q8NGV0	311 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	CPT1C	Q8TCG5	803 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	PROKR1	Q8TCW9	393 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	N4BP2L2	Q92802	583 aa	Predicted RBP	11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	COL26A1	Q96A83	441 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	DHRS4	Q9BTZ2	278 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	KIFC1	Q9BW19	673 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	IL22	Q9GZX6	179 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	IRAK4	Q9NWZ3	460 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	GNPTG	Q9UJJ9	305 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	PLCL2	Q9UPR0	1127 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	DRG1	Q9Y295	367 aa	Known RBP	11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	AP1M2	Q9Y6Q5	423 aa		11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	DIDO1	Q9BTC0	2240 aa	Known RBP	11.18	□□□□□ -0.62
VTI1A-208	ENST00000494728	MYO9A	B2RTY4	2548 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	ZGRF1	Q86YA3	2104 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	MAP3K7	O43318	606 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	CEP104	O60308	925 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	VAPB	O95292	243 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	HBQ1	P09105	142 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	CCDC175	P0C221	793 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	AGXT	P21549	392 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	FOLR3	P41439	243 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	DCD	P81605	110 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	FASTK	Q14296	549 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	DCAF10	Q5QP82	559 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	PTRHD1	Q6GMV3	140 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	FRMPD2B	Q6IN97	320 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	MED25	Q71SY5	747 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	CAND1	Q86VP6	1230 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	RAB43	Q86YS6	212 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	MCAT	Q8IVS2	390 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	GIMAP7	Q8NHV1	300 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	INPP5D	Q92835	1189 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	ZNF285	Q96NJ3	590 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	TTC1	Q99614	292 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	SPSB2	Q99619	263 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	SMAD5	Q99717	465 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	SLC30A3	Q99726	388 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	MRM3	Q9HC36	420 aa	Known RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	GPR83	Q9NYM4	423 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	IFT80	Q9P2H3	777 aa	Predicted RBP	11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	CTSF	Q9UBX1	484 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	ANAPC5	Q9UJX4	755 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	SOX13	Q9UN79	622 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	SRPK3	Q9UPE1	567 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	PADI2	Q9Y2J8	665 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728	MAP4K5	Q9Y4K4	846 aa		11.17	□□□□□ -0.62
VTI1A-208	ENST00000494728		A0A1B0GX78	115 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	ARHGEF33	A8MVX0	844 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	S1PR4	O95977	384 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	FMO4	P31512	558 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	MAGEA6	P43360	314 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	TMED2	Q15363	201 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	SF1	Q15637	639 aa	Known RBP	11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	HIST2H2BC	Q6DN03	193 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	TLDC1	Q6P9B6	456 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	LRRC8B	Q6P9F7	803 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	FIGLA	Q6QHK4	219 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	SHISA6	Q6ZSJ9	500 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	TTLL10	Q6ZVT0	673 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	CENPU	Q71F23	418 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	GSTA5	Q7RTV2	222 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	LRRC8A	Q8IWT6	810 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	FAM26E	Q8N5C1	309 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	OTUD6B	Q8N6M0	293 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	OR2L3	Q8NG85	312 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	MS4A14	Q96JA4	679 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	MIPEP	Q99797	713 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	NDC1	Q9BTX1	674 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	TSSK1B	Q9BXA7	367 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	SLC6A20	Q9NP91	592 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	TXLNG	Q9NUQ3	528 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	P4HTM	Q9NXG6	502 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	BFAR	Q9NZS9	450 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	STOX2	Q9P2F5	926 aa	Predicted RBP	11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	NDOR1	Q9UHB4	597 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	ZKSCAN5	Q9Y2L8	839 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	CRYL1	Q9Y2S2	319 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	PPP2R2C	Q9Y2T4	447 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	MED16	Q9Y2X0	877 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	ZNF451	Q9Y4E5	1061 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	CSAG2	Q9Y5P2	127 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	SCN3A	Q9NY46	2000 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	ABCA12	Q86UK0	2595 aa		11.16	□□□□□ -0.62
VTI1A-208	ENST00000494728	SCN2A	Q99250	2005 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	LOC105369274	A0A096LPK9	316 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	IGKV1-8	A0A0C4DH67	115 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	LOC102723532	A0A0G2JNH3	316 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	BLACE	A4D250	179 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	GOLGA6L6	A8MZA4	724 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	NDUFS3	O75489	264 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	MATN4	O95460	622 aa		11.15	□□□□□ -0.62
VTI1A-208	ENST00000494728	RPN2	P04844	631 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms