RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PCDHB3Q9Y5E6 796 aa12.76□□□□□ -0.37
ERCC3-209ENST00000494464 CFAP46Q8IYW2 2715 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 FAM237BA0A1B0GVD1 139 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 IQCF5A8MTL0 148 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 C21orf140B9A014 251 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 PFDN6O15212 129 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 AVILO75366 819 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 SCRG1O75711 98 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 RECKO95980 971 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 CHRM5P08912 532 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-209ENST00000494464 GSTA2P09210 222 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 TPBGLP0DKB5 382 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 SFTPCP11686 197 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 F8A1P23610 371 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 PKLRP30613 574 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 CSE1LP55060 971 aaKnown RBP12.75□□□□□ -0.37
ERCC3-209ENST00000494464 KLHL38Q2WGJ6 581 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 BBS9Q3SYG4 887 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 MSS51Q4VC12 460 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 CES3Q6UWW8 571 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 ZNF517Q6ZMY9 492 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-209ENST00000494464 UNC5AQ6ZN44 842 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 SDCCAG8Q86SQ7 713 aaPredicted RBP12.75□□□□□ -0.37
ERCC3-209ENST00000494464 TMEM126BQ8IUX1 230 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 OTUD6BQ8N6M0 293 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 FBXO36Q8NEA4 188 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 FLVCR1-AS1Q8TAF5 88 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 LPGAT1Q92604 370 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 LRFN5Q96NI6 719 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 TRAPPC9Q96Q05 1148 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 MENTQ9BUN1 341 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 FAM117AQ9C073 453 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 ADNPQ9H2P0 1102 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 ACSS3Q9H6R3 686 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 SAMD15Q9P1V8 674 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 ACTL7BQ9Y614 415 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 TEX264Q9Y6I9 313 aa12.75□□□□□ -0.37
ERCC3-209ENST00000494464 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 MAGEB16A2A368 324 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 SMIM23A6NLE4 172 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 H3BMM5 538 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 NKX2-8O15522 239 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 MAP3K7O43318 606 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 ESR1P03372 595 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 FAM87AP0C7U9 286 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 UGT2B7P16662 529 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 TCN2P20062 427 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 HPDP32754 393 aaPredicted RBP12.74□□□□□ -0.37
ERCC3-209ENST00000494464 MDH1P40925 334 aaKnown RBP12.74□□□□□ -0.37
ERCC3-209ENST00000494464 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 RAB28P51157 221 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 GPX6P59796 221 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 ABRQ12979 859 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 KIR2DS3Q14952 304 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 SLC5A12Q1EHB4 618 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 CTSL3PQ5NE16 218 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 PLEKHS1Q5SXH7 462 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 TMEM135Q86UB9 458 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 C19orf47Q8N9M1 422 aaKnown RBP12.74□□□□□ -0.37
ERCC3-209ENST00000494464 CT55Q8WUE5 264 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 RNF31Q96EP0 1072 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 BIRC8Q96P09 236 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 OR2A14Q96R47 310 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 TUBD1Q9UJT1 453 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 VPS9D1Q9Y2B5 631 aa12.74□□□□□ -0.37
ERCC3-209ENST00000494464 TDRKHQ9Y2W6 561 aaKnown RBP12.74□□□□□ -0.37
ERCC3-209ENST00000494464 MRPS18BQ9Y676 258 aaKnown RBP12.74□□□□□ -0.37
ERCC3-209ENST00000494464 BOD1L1Q8NFC6 3051 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 A0A0J9YY10 115 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 NTRK1P04629 796 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 PRKAR1AP10644 381 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 PVRP15151 417 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 PEBP1P30086 187 aaKnown RBP12.73□□□□□ -0.37
ERCC3-209ENST00000494464 ELK3P41970 407 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 CCR10P46092 362 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 GNGT1P63211 74 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 GRB7Q14451 532 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 GBX1Q14549 363 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 CDHR3Q6ZTQ4 885 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 OTOAQ7RTW8 1153 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 CILP2Q8IUL8 1156 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 GSDMBQ8TAX9 411 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 ZNF669Q96BR6 464 aaPredicted RBP12.73□□□□□ -0.37
ERCC3-209ENST00000494464 DHRS4Q9BTZ2 278 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 RAB11FIP5Q9BXF6 653 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 STARD5Q9NSY2 213 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 INTS10Q9NVR2 710 aaKnown RBP12.73□□□□□ -0.37
ERCC3-209ENST00000494464 GEMIN8Q9NWZ8 242 aaKnown RBP12.73□□□□□ -0.37
ERCC3-209ENST00000494464 SPHK1Q9NYA1 384 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 PLAGL1Q9UM63 463 aa12.73□□□□□ -0.37
ERCC3-209ENST00000494464 SNRNP200O75643 2136 aaKnown RBP12.73□□□□□ -0.37
ERCC3-209ENST00000494464 ZCWPW2A0A1B0GU75 182 aa12.72□□□□□ -0.37
ERCC3-209ENST00000494464 B8ZZF3 427 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms