RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PPEF2O14830 753 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 TIE1P35590 1138 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 RBBP4Q09028 425 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 ERI1Q8IV48 349 aaKnown RBP18.73■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF395Q9H8N7 513 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-207ENST00000494090 RB1P06400 928 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 RYKP34925 604 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 NRG3P56975 720 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 IFNL1Q8IU54 200 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 C7orf43Q8WVR3 580 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 PIWIL1Q96J94 861 aaKnown RBP18.73■□□□□ 0.59
COL27A1-207ENST00000494090 CDK15Q96Q40 435 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 MKKSQ9NPJ1 570 aaPredicted RBP18.73■□□□□ 0.59
COL27A1-207ENST00000494090 LRRC70Q7Z2Q7 622 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 PQLC3Q8N755 202 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 LRRC15Q8TF66 581 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 SIGLEC10Q96LC7 697 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 SMOC2Q9H3U7 446 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 ZBTB26Q9HCK0 441 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 OAZ3Q9UMX2 235 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 WRBO00258 174 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 ACTR1BP42025 376 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 ACTR1AP61163 376 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 PDE12Q6L8Q7 609 aaKnown RBP18.73■□□□□ 0.59
COL27A1-207ENST00000494090 HFE2Q6ZVN8 426 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 OXR1Q8N573 874 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 PTPN18Q99952 460 aa18.73■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF879B4DU55 563 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 PDCD5O14737 125 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 S100A9P06702 114 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CBSLP0DN79 551 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CSNK2A2P19784 350 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 FSHRP23945 695 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CBSP35520 551 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RASGEF1BQ0VAM2 473 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 UBXN2BQ14CS0 331 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CELF5Q8N6W0 485 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 TMEM145Q8NBT3 493 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 ATP6V1C2Q8NEY4 427 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 EZH1Q92800 747 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 HS3ST4Q9Y661 456 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 PCDH7O60245 1069 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CYP11A1P05108 521 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 MAT2AP31153 395 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RFC2P35250 354 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 PCLAFQ15004 111 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RAB30Q15771 203 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 PUS10Q3MIT2 529 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 ZBED5Q49AG3 693 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 OGFOD2Q6N063 350 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RNF19BQ6ZMZ0 732 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 MTERF1Q99551 399 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CERS4Q9HA82 394 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 MRM3Q9HC36 420 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 UPB1Q9UBR1 384 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 DCLK1O15075 740 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 TBX18O95935 607 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 ALDH3A2P51648 485 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 PLA2G16P53816 162 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 LMO3Q8TAP4 145 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 SHDQ96IW2 340 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 FARSBQ9NSD9 589 aaKnown RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 SLC2A6Q9UGQ3 507 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 COL1A1P02452 1464 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 TMEM233B4DJY2 109 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RENP00797 406 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 ZNF30P17039 623 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 EFNA1P20827 205 aaPredicted RBP18.72■□□□□ 0.59
COL27A1-207ENST00000494090 CASRP41180 1078 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 GPR153Q6NV75 609 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 TAS2R7Q9NYW3 318 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 MOCS1Q9NZB8 636 aa18.72■□□□□ 0.59
COL27A1-207ENST00000494090 SLC22A1O15245 554 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 DNAJA1P31689 397 aaKnown RBP18.71■□□□□ 0.59
COL27A1-207ENST00000494090 MLLT6P55198 1093 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-207ENST00000494090 LRRC32Q14392 662 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 GPR151Q8TDV0 419 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SERINC1Q9NRX5 453 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 GIN1Q9NXP7 522 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 CFL2Q9Y281 166 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 A0A0U1RQF3 1178 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 A0A1W2PRB8 838 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SEMA3DO95025 777 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 ADH5P11766 374 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 CLCN4P51793 760 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SPATS1Q496A3 300 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 NADK2Q4G0N4 442 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 GPALPP1Q8IXQ4 340 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 PHTF2Q8N3S3 785 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 OR2AJ1Q8NGZ0 328 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 EFCAB9A8MZ26 197 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 TYROBPO43914 113 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 RGS20O76081 388 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 SERPINA3P01011 423 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 PIM1P11309 404 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-207ENST00000494090 CAMKVQ8NCB2 501 aa18.71■□□□□ 0.59
COL27A1-207ENST00000494090 FBXO15Q8NCQ5 510 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms