RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 hCG_1809904A0A1W2PP81 198 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 A0A1W2PPE2 198 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 A0A1W2PR64 198 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 SYNDIG1LA6NDD5 238 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 ENO4A6NNW6 628 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 H7C423 109 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 EXTL3O43909 919 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 TRUB2O95900 331 aaKnown RBP3.69□□□□□ -1.82
ITGB1-216ENST00000493758 CDH3P22223 829 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 MPZP25189 248 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 SLC6A12P48065 614 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 ASCL1P50553 236 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 CCR3P51677 355 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 LIMK1P53667 647 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 KLC1Q07866 573 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 TAF10Q12962 218 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 ALCAMQ13740 583 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 BECN1Q14457 450 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 SGSM1Q2NKQ1 1148 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 PHLDA2Q53GA4 152 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 SLC35D3Q5M8T2 416 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 SLC25A47Q6Q0C1 308 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 G2E3Q7L622 706 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 KRT74Q7RTS7 529 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 CAMKMTQ7Z624 323 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 BMPERQ8N8U9 685 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 AVL9Q8NBF6 648 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 DBF4BQ8NFT6 615 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 OR2T6Q8NHC8 308 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 MOB3AQ96BX8 217 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 C10orf90Q96M02 699 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 FAM20AQ96MK3 541 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 MUS81Q96NY9 551 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 THAP2Q9H0W7 228 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 OPA3Q9H6K4 179 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 MYNNQ9NPC7 610 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 FAM207AQ9NSI2 230 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-216ENST00000493758 HAO2Q9NYQ3 351 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 OR6C2Q9NZP2 312 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 EPHA6Q9UF33 1036 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 WDR37Q9Y2I8 494 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 CACNA1FO60840 1977 aa3.69□□□□□ -1.82
ITGB1-216ENST00000493758 IGLV7-46A0A075B6I9 117 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 C15orf61A6NNL5 157 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 C2CD4DB7Z1M9 353 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 ARPC2O15144 300 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 C22orf31O95567 290 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 STARD3NLO95772 234 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 ADRB2P07550 413 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 DNASE1P24855 282 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 LHX1P48742 406 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 CLDN15P56746 228 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 HNRNPDQ14103 355 aaKnown RBP3.68□□□□□ -1.82
ITGB1-216ENST00000493758 HERC3Q15034 1050 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 CRY2Q49AN0 593 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 SLC25A53Q5H9E4 307 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 WDR78Q5VTH9 848 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 MFSD12Q6NUT3 480 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 IL27RAQ6UWB1 636 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 GTSCR1Q86UQ5 136 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 MMD2Q8IY49 270 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-216ENST00000493758 POMGNT2Q8NAT1 580 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 OR13C3Q8NGS6 347 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 SYN2Q92777 582 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-216ENST00000493758 AZIN2Q96A70 460 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 NXNL1Q96CM4 212 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 SYT15Q9BQS2 421 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 SYT11Q9BT88 431 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 CCDC106Q9BWC9 280 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 APOL6Q9BWW8 343 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 CLEC7AQ9BXN2 247 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 TRIM15Q9C019 465 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 WWTR1Q9GZV5 400 aa3.68□□□□□ -1.82
ITGB1-216ENST00000493758 MAGED1Q9Y5V3 778 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-216ENST00000493758 TRBC2A0A5B9 178 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 TRIM77I1YAP6 450 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 MEIS2O14770 477 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 SEC24AO95486 1093 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 TBX6O95947 436 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 TRIM49P0CI25 452 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 TRIM49CP0CI26 452 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 EPCAMP16422 314 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 PTPN3P26045 913 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 LEPRP48357 1165 aaKnown RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 HUNKP57058 714 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 IFI35P80217 286 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 CUL3Q13618 768 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 VWC2Q2TAL6 325 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 HLA-BQ31612 363 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 XKR3Q5GH77 459 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 C9orf152Q5JTZ5 239 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 ERMARDQ5T6L9 678 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 BSPRYQ5W0U4 402 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 ZNF772Q68DY9 489 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 UGT3A1Q6NUS8 523 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 RBPMS2Q6ZRY4 209 aaKnown RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 STXBP4Q6ZWJ1 553 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 ENOSF1Q7L5Y1 443 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms