RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CPSF2Q9P2I0 782 aaKnown RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 PTBP2Q9UKA9 531 aaKnown RBP11.19□□□□□ -0.62
LSM2-214ENST00000493387 PLAGL1Q9UM63 463 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
LSM2-214ENST00000493387 PIPSLA2A3N6 862 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 NCF1BA6NI72 391 aaPredicted RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 NCF1CA8MVU1 366 aaPredicted RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 E7ENX8 843 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 TK2O00142 265 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 RFPL3O75679 317 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 STK16O75716 305 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CPNE6O95741 557 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 MTHFD2P13995 350 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 NCF1P14598 390 aaPredicted RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 CPA3P15088 417 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CREB1P16220 341 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 TYRP1P17643 537 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CD1CP29017 333 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 OAS2P29728 719 aaKnown RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 RPA3P35244 121 aaPredicted RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 PLA2G5P39877 138 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CAPZBP47756 277 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 PRKAA2P54646 552 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 NFKB2Q00653 900 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 TAP2Q03519 686 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 NAE1Q13564 534 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 SETDB1Q15047 1291 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 PFKFB4Q16877 469 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 TTMPQ5BVD1 217 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 KLHDC8AQ8IYD2 350 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 ADGRF3Q8IZF5 1079 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CARFQ8N187 725 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 DEFB124Q8NES8 71 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 OR56A3Q8NH54 315 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 NCSTNQ92542 709 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 ZBTB9Q96C00 473 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 FAM111AQ96PZ2 611 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 RTKNQ9BST9 563 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 HAUS8Q9BT25 410 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 SGPP1Q9BX95 441 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CAPS2Q9BXY5 557 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 TWSG1Q9GZX9 223 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 CCDC177Q9NQR7 707 aaPredicted RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 ACTR10Q9NZ32 417 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 EMCNQ9ULC0 261 aa11.18□□□□□ -0.62
LSM2-214ENST00000493387 APOBEC2Q9Y235 224 aaKnown RBP11.18□□□□□ -0.62
LSM2-214ENST00000493387 ANKRD12Q6UB98 2062 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 TMEM120BA0PK00 339 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 GSAPA4D1B5 854 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 ISM1B1AKI9 464 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 BTN3A3O00478 584 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 RPLP0P05388 317 aaKnown RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 POLR2CP19387 275 aaPredicted RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 HRH2P25021 359 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 PIK3CGP48736 1102 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 DNAJB13P59910 316 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 CCL7P80098 99 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 ABATP80404 500 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 TSTA3Q13630 321 aaPredicted RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 PCBP2Q15366 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
LSM2-214ENST00000493387 SLC5A12Q1EHB4 618 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 PTCHD3Q3KNS1 767 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 AMZ1Q400G9 498 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 THEMIS2Q5TEJ8 643 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 TMEM71Q6P5X7 295 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 MBOAT1Q6ZNC8 495 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 LRRC70Q7Z2Q7 622 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 LRRC56Q8IYG6 542 aaPredicted RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 PTGR2Q8N8N7 351 aaPredicted RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 LINC01555Q8NAE3 123 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 ARMC2Q8NEN0 867 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 JPH3Q8WXH2 748 aaPredicted RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 MED8Q96G25 268 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 GFM1Q96RP9 751 aaKnown RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 CD244Q9BZW8 370 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 ZMYND15Q9H091 742 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 ATG10Q9H0Y0 220 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 INTS7Q9NVH2 962 aaKnown RBP11.17□□□□□ -0.62
LSM2-214ENST00000493387 OGFRQ9NZT2 677 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 SLC17A7Q9P2U7 560 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 COPG2Q9UBF2 871 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 CIDEBQ9UHD4 219 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 KCNE2Q9Y6J6 123 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 ASXL3Q9C0F0 2248 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 GVINP1Q7Z2Y8 2422 aa11.17□□□□□ -0.62
LSM2-214ENST00000493387 RP1P56715 2156 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 A8MT66 165 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 G3V2L1 256 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 TMX2-CTNND1H3BSU7 103 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 K7EPI3 171 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 NTN3O00634 580 aaPredicted RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 BIRC5O15392 142 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 TOX3O15405 576 aaPredicted RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 CAPN5O15484 640 aaPredicted RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 TAPBPO15533 448 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 MAP3K7O43318 606 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 PRICKLE3O43900 615 aaPredicted RBP11.16□□□□□ -0.62
LSM2-214ENST00000493387 DLX3O60479 287 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 TRIM13O60858 407 aa11.16□□□□□ -0.62
LSM2-214ENST00000493387 SBK3P0C264 359 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms