RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161		A0A1B0GUH1	482 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	CCDC162P	A2VCL2	907 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	KRT87P	A6NCN2	255 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	MROH6	A6NGR9	719 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	VSTM2B	A6NLU5	285 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	CTSV	O60911	334 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	STK10	O94804	968 aa	Known RBP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	F10	P00742	488 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	CD9	P21926	228 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	MSN	P26038	577 aa	Known RBP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	CTNNA2	P26232	953 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	CCR7	P32248	378 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	RAB28	P51157	221 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	COPS2	P61201	443 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	KLC1	Q07866	573 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	ITIH4	Q14624	930 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	NAA30	Q147X3	362 aa	Predicted RBP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	FRMPD2B	Q6IN97	320 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	FIGLA	Q6QHK4	219 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	BCORP1	Q8N888	145 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	CFAP61	Q8NHU2	1237 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	COG1	Q8WTW3	980 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	STYX	Q8WUJ0	223 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	MOCOS	Q96EN8	888 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	ZNF285	Q96NJ3	590 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	FERMT1	Q9BQL6	677 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	TRIM56	Q9BRZ2	755 aa	Known RBP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	SEMA3G	Q9NS98	782 aa		13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
SAMM50-204	ENST00000493161	IQCF5	A8MTL0	148 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PCDH17	O14917	1159 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	WISP2	O76076	250 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SNRPB2	P08579	225 aa	Known RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PIM1	P11309	404 aa	Predicted RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PSMA3	P25788	255 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PSMB5	P28074	263 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	CTNNA1	P35221	906 aa	Known RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	VSX2	P58304	361 aa	Predicted RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	HSPA14	Q0VDF9	509 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SEMA3A	Q14563	771 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	GRM7	Q14831	915 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SF1	Q15637	639 aa	Known RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	WASHC2D	Q5SRD0	308 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	RPUSD3	Q6P087	351 aa	Known RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	ARHGEF18	Q6ZSZ5	1173 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	LAPTM4B	Q86VI4	370 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SLC22A15	Q8IZD6	547 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	FAM71D	Q8N9W8	422 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	OR13J1	Q8NGT2	312 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PSMF1	Q92530	271 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	ALG3	Q92685	438 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	LMF1	Q96S06	567 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SELENOS	Q9BQE4	189 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	CRB3	Q9BUF7	120 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	LUC7L	Q9NQ29	371 aa	Known RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PTGFRN	Q9P2B2	879 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SLC2A6	Q9UGQ3	507 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	EFR3B	Q9Y2G0	817 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	PCDHA3	Q9Y5H8	950 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	SVIL	O95425	2214 aa		13.09	□□□□□ -0.31
SAMM50-204	ENST00000493161	ADGRG4	Q8IZF6	3080 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	LOC105369274	A0A096LPK9	316 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	LOC102723532	A0A0G2JNH3	316 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	FITM1	A5D6W6	292 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	RCCD1	A6NED2	376 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	QSOX1	O00391	747 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	FFAR3	O14843	346 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	GPR42	O15529	346 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	CBFA2T2	O43439	604 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	PRICKLE3	O43900	615 aa	Predicted RBP	13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	HP	P00738	406 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	CELA2A	P08217	269 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	TPM1	P09493	284 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	OR56A5	P0C7T3	313 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	PTPN7	P35236	360 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	GDF10	P55107	478 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	YBX1	P67809	324 aa	Known RBP	13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	ARG2	P78540	354 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	PARP6	Q2NL67	630 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	CCSMST1	Q4G0I0	132 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	DNAJC21	Q5F1R6	531 aa	Known RBP	13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	VWA2	Q5GFL6	755 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	ATG9B	Q674R7	924 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	OR4N4	Q8N0Y3	316 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	KRT222	Q8N1A0	295 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	SIRT6	Q8N6T7	355 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	TTC29	Q8NA56	475 aa	Predicted RBP	13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	OR2L8	Q8NGY9	312 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	STT3B	Q8TCJ2	826 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	BRIX1	Q8TDN6	353 aa	Known RBP	13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	DENND1A	Q8TEH3	1009 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	HDAC10	Q969S8	669 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	LRRC40	Q9H9A6	602 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	ENAM	Q9NRM1	1142 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	C3orf18	Q9UK00	162 aa		13.08	□□□□□ -0.32
SAMM50-204	ENST00000493161	NXT1	Q9UKK6	140 aa	Known RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms