RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 NKX1-2Q9UD57 310 aaPredicted RBP8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 CIDEBQ9UHD4 219 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 BCAP29Q9UHQ4 241 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 ZNHIT2Q9UHR6 403 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 LEF1Q9UJU2 399 aaPredicted RBP8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 ANGPTL2Q9UKU9 493 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 MMP17Q9ULZ9 603 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 ASF1AQ9Y294 204 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 DYRK1BQ9Y463 629 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 L3MBTL1Q9Y468 752 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 PCDHGA7Q9Y5G6 932 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 C5orf42Q9H799 3197 aa8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 RANBP2P49792 3224 aaKnown RBP8.88□□□□□ -0.99
SMARCC1-208ENST00000492896 FANCMQ8IYD8 2048 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 A0A1W2PP18 115 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 TCRBV21S2A2A0A5A6 115 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 E7EQ34 232 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 NPIPB8E9PQR5 432 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 IFRD1O00458 451 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 PRAMEF4O60810 478 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 EEDO75530 441 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SORBS2O94875 1100 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC35G4P0C7Q5 338 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SRFP11831 508 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 GNAZP19086 355 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 NDUFV2P19404 249 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 JAK1P23458 1154 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 MAPK1P28482 360 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 MAT2AP31153 395 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 KIAA1024LP59773 190 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 AP2B1P63010 937 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 PCDH1Q08174 1060 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 PRKG2Q13237 762 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 CCINQ13939 588 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 NFYCQ13952 458 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 CEACAM7Q14002 265 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 CCNIQ14094 377 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 DOC2AQ14183 400 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 ZNF423Q2M1K9 1284 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 VPS26BQ4G0F5 336 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 TIGD2Q4W5G0 525 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 RFTN2Q52LD8 501 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SAMD4BQ5PRF9 694 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 IER5LQ5T953 404 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 PRAMEF9Q5VWM5 478 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 FRG2Q64ET8 278 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 C8orf82Q6P1X6 216 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 AAGABQ6PD74 315 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 TMPRSS11BQ86T26 416 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 FAM124AQ86V42 546 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 RETREG3Q86VR2 466 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 FAM9CQ8IZT9 166 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 RAD51AP1Q96B01 352 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 CMTM7Q96FZ5 175 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC45A3Q96JT2 553 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 MRGPRX1Q96LB2 322 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 FRG2BQ96QU4 278 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 OR4K3Q96R72 315 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 UHRF1Q96T88 793 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 MYOCQ99972 504 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 HOPXQ9BPY8 73 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 APOOQ9BUR5 198 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SGPP1Q9BX95 441 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 FZD3Q9NPG1 666 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 CCDC177Q9NQR7 707 aaPredicted RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC2A4RGQ9NR83 387 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 INTS7Q9NVH2 962 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 STOML1Q9UBI4 398 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SUCOQ9UBS9 1254 aaKnown RBP8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC23A2Q9UGH3 650 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 PACSIN3Q9UKS6 424 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 ACSL5Q9ULC5 683 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC17A4Q9Y2C5 497 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 KCNE2Q9Y6J6 123 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 PLXND1Q9Y4D7 1925 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
SMARCC1-208ENST00000492896 KANSL1LA0AUZ9 987 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 LRRC72A6NJI9 287 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 ZNF839A8K0R7 811 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 E7ENX8 843 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 H0YIV9 168 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 MAN2B1O00754 1011 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 SLC31A1O15431 190 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 KCNJ13O60928 360 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 SEC22BO75396 215 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PRPS2P11908 318 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 ACP5P13686 325 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 HSD3B1P14060 373 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 ACPPP15309 386 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 PCSK2P16519 638 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 XRCC1P18887 633 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 CD22P20273 847 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 HSD3B2P26439 372 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 VARSP26640 1264 aaKnown RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 IL12AP29459 219 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 HOXD11P31277 338 aaPredicted RBP8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 CASP2P42575 452 aa8.86□□□□□ -0.99
SMARCC1-208ENST00000492896 ZFP36L2P47974 494 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms