RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 ATP1B2P14415 290 aaPredicted RBP12.52□□□□□ -0.4
PRAME-213ENST00000492657 TCF3P15923 654 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 NR4A1P22736 598 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 MYF6P23409 242 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 RPS9P46781 194 aaKnown RBP12.52□□□□□ -0.4
PRAME-213ENST00000492657 CYP4F3Q08477 520 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 CBX2Q14781 532 aaPredicted RBP12.52□□□□□ -0.4
PRAME-213ENST00000492657 CYBRD1Q53TN4 286 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 ARSIQ5FYB1 569 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 GPR107Q5VW38 600 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 ANKRD34AQ69YU3 496 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 ALDH16A1Q8IZ83 802 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 LILRA3Q8N6C8 439 aaPredicted RBP12.52□□□□□ -0.4
PRAME-213ENST00000492657 OR2T12Q8NG77 320 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 OR10Q1Q8NGQ4 319 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 ISOC1Q96CN7 298 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 C19orf43Q9BQ61 176 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 INPP5KQ9BT40 448 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 CRISPLD2Q9H0B8 497 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 CLMPQ9H6B4 373 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 MAGEL2Q9UJ55 1249 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 FADS3Q9Y5Q0 445 aa12.52□□□□□ -0.4
PRAME-213ENST00000492657 RANBP2P49792 3224 aaKnown RBP12.52□□□□□ -0.4
PRAME-213ENST00000492657 SGTAO43765 313 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 LEFTY1O75610 366 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 BMP10O95393 424 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 FUCA1P04066 466 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 CBSLP0DN79 551 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 CDH1P12830 882 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 CBSP35520 551 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 PTPN5P54829 565 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 LAPTM5Q13571 262 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 ZNF697Q5TEC3 545 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 GCNT7Q6ZNI0 430 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 SPRED2Q7Z698 418 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 APIPQ96GX9 242 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 LIMD1Q9UGP4 676 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 KCNE1BA0A087WTH5 132 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 GSTA4O15217 222 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 KRT6AP02538 564 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 KRT6BP04259 564 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 KRT6CP48668 564 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 CD97P48960 835 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 ABRQ12979 859 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 TMEM26Q6ZUK4 368 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 DHRSXQ8N5I4 330 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 ZNF548Q8NEK5 533 aaPredicted RBP12.52□□□□□ -0.41
PRAME-213ENST00000492657 OR8J3Q8NGG0 315 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 ELMO1Q92556 727 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 TMBIM1Q969X1 311 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 ZNF641Q96N77 438 aaPredicted RBP12.52□□□□□ -0.41
PRAME-213ENST00000492657 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
PRAME-213ENST00000492657 FAM83DQ9H4H8 585 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 ELOVL6Q9H5J4 265 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 PCDH12Q9NPG4 1184 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 TDP1Q9NUW8 608 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
PRAME-213ENST00000492657 ADGRE2Q9UHX3 823 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 PPT2Q9UMR5 302 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 PCDHB14Q9Y5E9 798 aa12.52□□□□□ -0.41
PRAME-213ENST00000492657 A0A1W2PQ67 120 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 SH3PXD2BA1X283 911 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 H0Y858 1186 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 IFRD1O00458 451 aaPredicted RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 NUAK1O60285 661 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 ZBTB11O95625 1053 aaPredicted RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 HIST1H2AGP0C0S8 130 aaPredicted RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 HIST1H2ADP20671 130 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 CDKN2CP42773 168 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 MAD2L1Q13257 205 aaPredicted RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 GBX1Q14549 363 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 SF1Q15637 639 aaKnown RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 PGS1Q32NB8 556 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 CCSMST1Q4G0I0 132 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 Q6ZNX1 250 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 ST13P5Q8NFI4 369 aaPredicted RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 HIST1H2AHQ96KK5 128 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 HIST1H2AJQ99878 128 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 H2AFJQ9BTM1 129 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 LTB4R2Q9NPC1 389 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 SPHK2Q9NRA0 654 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 CORINQ9Y5Q5 1042 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 FADS2P1A8MWK0 482 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 SH3BGRLO75368 114 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 CTSLP07711 333 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 TIMP2P16035 220 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 SLC6A12P48065 614 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 RPS14P62263 151 aaKnown RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 GSTM4Q03013 218 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 RUNDC3AQ59EK9 446 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 C1orf53Q5VUE5 145 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 RAVER1Q8IY67 606 aaKnown RBP12.51□□□□□ -0.41
PRAME-213ENST00000492657 OSCP1Q8WVF1 389 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 ING5Q8WYH8 240 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 APOLD1Q96LR9 279 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 EBPLQ9BY08 206 aa12.51□□□□□ -0.41
PRAME-213ENST00000492657 SLC29A3Q9BZD2 475 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms