RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 SLC10A2Q12908 348 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-213ENST00000492506 ABRQ12979 859 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 MPP3Q13368 585 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 PIGHQ14442 188 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-213ENST00000492506 KRT81Q14533 505 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 FAM198BQ6UWH4 519 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 LRRC74BQ6ZQY2 392 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 FAM83HQ6ZRV2 1179 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-213ENST00000492506 SLC34A3Q8N130 599 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 RIBC1Q8N443 379 aaPredicted RBP12.75□□□□□ -0.37
HDAC3-213ENST00000492506 KIF2BQ8N4N8 673 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 OR8K5Q8NH50 307 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 WDR60Q8WVS4 1066 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 ITPKCQ96DU7 683 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 PPM1MQ96MI6 270 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 VPS35Q96QK1 796 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 SMARCAL1Q9NZC9 954 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 C5AR2Q9P296 337 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 NTNG1Q9Y2I2 539 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 HIVEP1P15822 2718 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 A8MUI8 341 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 AURKAO14965 403 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ZBTB11O95625 1053 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-213ENST00000492506 KLK3P07288 261 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-213ENST00000492506 HALP42357 657 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ARL4DP49703 201 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 SLC18A1P54219 525 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 RAPSNQ13702 412 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ATP1A4Q13733 1029 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ATP13A4Q4VNC1 1196 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF789Q5FWF6 425 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ARMC3Q5W041 872 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 DUPD1Q68J44 220 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 KLHL35Q6PF15 583 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 IGFL3Q6UXB1 125 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ZC3H18Q86VM9 953 aaKnown RBP12.74□□□□□ -0.37
HDAC3-213ENST00000492506 FITM2Q8N6M3 262 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 HDAC11Q96DB2 347 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 TRIM11Q96F44 468 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 LRRC37BQ96QE4 947 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 PHF12Q96QT6 1004 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ERP44Q9BS26 406 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 RAD18Q9NS91 495 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 FGFR1OP2Q9NVK5 253 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 HRASLS2Q9NWW9 162 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 SPATA7Q9P0W8 599 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
HDAC3-213ENST00000492506 BTRCQ9Y297 605 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 B3GNT3Q9Y2A9 372 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF711Q9Y462 761 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 CNTRLQ7Z7A1 2325 aa12.74□□□□□ -0.37
HDAC3-213ENST00000492506 UBA6A0AVT1 1052 aaPredicted RBP12.73□□□□□ -0.37
HDAC3-213ENST00000492506 F8W8V4 182 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 KCNK1O00180 336 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 KCNJ13O60928 360 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 GAS8O95995 478 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 SLC4A1P02730 911 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 EIF2S1P05198 315 aaKnown RBP12.73□□□□□ -0.37
HDAC3-213ENST00000492506 VCLP18206 1134 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 CA5AP35218 305 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 KPNA2P52292 529 aaKnown RBP12.73□□□□□ -0.37
HDAC3-213ENST00000492506 CTSCP53634 463 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 RIPPLY3P57055 190 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 HPCAP84074 193 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 ZBTB17Q13105 803 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 ASIC2Q16515 512 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 C6orf163Q5TEZ5 329 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 VWA5B1Q5TIE3 1220 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 AMZ2Q86W34 360 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 CPNE8Q86YQ8 564 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 TRAPPC5Q8IUR0 188 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 CARFQ8N187 725 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 RASGEF1AQ8N9B8 481 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 NAT14Q8WUY8 206 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 CPT1BQ92523 772 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 TADA1Q96BN2 335 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 FAF2Q96CS3 445 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 PSMD13Q9UNM6 376 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 SPO11Q9Y5K1 396 aa12.73□□□□□ -0.37
HDAC3-213ENST00000492506 A0A1B0GVG6 124 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 DDX3YO15523 660 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 CCDC22O60826 627 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 POP7O75817 140 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF189O75820 626 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 KRT38O76015 456 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 FTCDO95954 541 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 LYNP07948 512 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 MTHFD1P11586 935 aaKnown RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 RRADP55042 308 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 IFI35P80217 286 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 NFE2L1Q14494 772 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 NCF4Q15080 339 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 PLCL1Q15111 1095 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF385CQ66K41 422 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 SPOCD1Q6ZMY3 1216 aa12.72□□□□□ -0.37
HDAC3-213ENST00000492506 NCCRP1Q6ZVX7 275 aaPredicted RBP12.72□□□□□ -0.37
HDAC3-213ENST00000492506 ACAD11Q709F0 780 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms