RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 H7C0C1 242 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 H7C0S8 307 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 APOC4-APOC2K7ER74 178 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ZSCAN12O43309 604 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 USP1O94782 785 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 KLHL18O94889 574 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 APOC2P02655 101 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 UQCRHP07919 91 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 PRSS56P0CW18 603 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 TPBGLP0DKB5 382 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ACPPP15309 386 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ACADLP28330 430 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 HTR1EP28566 365 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 PKLRP30613 574 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 NSG1P42857 185 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ATP5OP48047 213 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 CARSP49589 748 aaKnown RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 Q0VFX4 171 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 MSLNQ13421 630 aaPredicted RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 GRM7Q14831 915 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 BRD3Q15059 726 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 DBN1Q16643 649 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ZNF630Q2M218 657 aaPredicted RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 VWA2Q5GFL6 755 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 TCTE1Q5JU00 501 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 C11orf63Q6NUN7 778 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 RPTNQ6XPR3 784 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 NLRP9Q7RTR0 991 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 FAM20CQ8IXL6 584 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 CCDC110Q8TBZ0 833 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 TBL1YQ9BQ87 522 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 ZNF160Q9HCG1 818 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 LZTFL1Q9NQ48 299 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 INTS7Q9NVH2 962 aaKnown RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 SMARCAL1Q9NZC9 954 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 IL1RAPL1Q9NZN1 696 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 FEZ2Q9UHY8 353 aaPredicted RBP13.85□□□□□ -0.19
SSR4-212ENST00000491833 ITGB1BP2Q9UKP3 347 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 GUCA1BQ9UMX6 200 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 KLHL20Q9Y2M5 609 aa13.85□□□□□ -0.19
SSR4-212ENST00000491833 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.85□□□□□ -0.19
SSR4-212ENST00000491833 AKAP9Q99996 3911 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 BTNL10A8MVZ5 291 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 CCL21O00585 134 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 PJA2O43164 708 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 STK10O94804 968 aaKnown RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 MCM3P25205 808 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 RAB28P51157 221 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 HADHBP55084 474 aaKnown RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 PLOD1Q02809 727 aaPredicted RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 CACNG1Q06432 222 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 ITIH4Q14624 930 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 TCEAL1Q15170 157 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 ZC3H12BQ5HYM0 836 aaKnown RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 MICALCLQ6ZW33 695 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 CDKL3Q8IVW4 592 aaPredicted RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 KBTBD2Q8IY47 623 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 METTL27Q8N6F8 245 aaPredicted RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 SLC22A18Q96BI1 424 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 PPP1R2P1Q96PQ5 205 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 TAAR6Q96RI8 345 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 TRIM8Q9BZR9 551 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 C10orf88Q9H8K7 445 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.84□□□□□ -0.19
SSR4-212ENST00000491833 PDZD2O15018 2839 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 ADGRG4Q8IZF6 3080 aa13.84□□□□□ -0.19
SSR4-212ENST00000491833 SLC5A10A0PJK1 596 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 VSTM2BA6NLU5 285 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 UNC5CO95185 931 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 ZRANB2O95218 330 aaKnown RBP eCLIP13.83□□□□□ -0.2
SSR4-212ENST00000491833 S1PR4O95977 384 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 FDXRP22570 491 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 SOX11P35716 441 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 CA7P43166 264 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 OR1D4P47884 311 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 TNFSF10P50591 281 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.83□□□□□ -0.2
SSR4-212ENST00000491833 ANKRD20A2Q5SQ80 823 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 CCDC181Q5TID7 509 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 ANKRD20A1Q5TYW2 823 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 ANKRD20A3Q5VUR7 823 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 DENND5AQ6IQ26 1287 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 TMEM207Q6UWW9 146 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 BBS12Q6ZW61 710 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 PIANPQ8IYJ0 282 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 KATNAL2Q8IYT4 538 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
SSR4-212ENST00000491833 SELENOSQ9BQE4 189 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 ARNT2Q9HBZ2 717 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 NLE1Q9NVX2 485 aaPredicted RBP13.83□□□□□ -0.2
SSR4-212ENST00000491833 PTGFRNQ9P2B2 879 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 SH3BGRL2Q9UJC5 107 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 PPP2R2CQ9Y2T4 447 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 PRSS21Q9Y6M0 314 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 MAU2Q9Y6X3 613 aa13.83□□□□□ -0.2
SSR4-212ENST00000491833 NSG1A0A0A6YYJ2 146 aa13.82□□□□□ -0.2
SSR4-212ENST00000491833 RCCD1A6NED2 376 aa13.82□□□□□ -0.2
SSR4-212ENST00000491833 CRYABP02511 175 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms