RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 OR56A3Q8NH54 315 aa21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 NSUN5Q96P11 429 aaKnown RBP21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 DUSP23Q9BVJ7 150 aa21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 CAPS2Q9BXY5 557 aa21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 GSTO2Q9H4Y5 243 aa21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 STN1Q9H668 368 aaKnown RBP21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 XKR8Q9H6D3 395 aa21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 OPTCQ9UBM4 332 aa21.07■□□□□ 0.96
VCPKMT-204ENST00000491402 ZNF883P0CG24 379 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 TBPL1P62380 186 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 STX3Q13277 289 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 PLCL1Q15111 1095 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 STPG1Q5TH74 334 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 FRMD7Q6ZUT3 714 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 LINC01555Q8NAE3 123 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 OR4C6Q8NH72 309 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 PPP4R1Q8TF05 950 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 LCN9Q8WX39 176 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 JPH3Q8WXH2 748 aaPredicted RBP21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 PITPNM3Q9BZ71 974 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 SLC32A1Q9H598 525 aa21.06■□□□□ 0.96
VCPKMT-204ENST00000491402 ZNF839A8K0R7 811 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 K7EPI3 171 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 WDR47O94967 919 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 ALPPL2P10696 532 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 ARRB2P32121 409 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 CDH13P55290 713 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 RCN2Q14257 317 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 ZCCHC8Q6NZY4 707 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 TMEM26Q6ZUK4 368 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 LRRC70Q7Z2Q7 622 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 ALYREFQ86V81 257 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 SLC35F3Q8IY50 421 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 ZNF483Q8TF39 744 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 CNDP1Q96KN2 507 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 C20orf27Q9GZN8 174 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 DRC3Q9H069 523 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 INTS7Q9NVH2 962 aaKnown RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 SLC22A14Q9Y267 594 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 TMEM114B3SHH9 223 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 TRIM38O00635 465 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 PPM1DO15297 605 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 NPHS1O60500 1241 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 SHMT2P34897 504 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 PLA2G5P39877 138 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 CCR10P46092 362 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 NAA20P61599 178 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 SUSD1Q6UWL2 747 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 AMIGO1Q86WK6 493 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 KLHDC8AQ8IYD2 350 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 C2orf73Q8N5S3 287 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 TEX9Q8N6V9 391 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 OR4E2Q8NGC2 313 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 OR2L8Q8NGY9 312 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 HMGCLL1Q8TB92 370 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 SGPP1Q9BX95 441 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 ZBTB26Q9HCK0 441 aa21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 SEMA4BQ9NPR2 832 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 CCDC177Q9NQR7 707 aaPredicted RBP21.05■□□□□ 0.96
VCPKMT-204ENST00000491402 DMXL1Q9Y485 3027 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 CEP250Q9BV73 2442 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 ITM2AO43736 263 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 SNNO75324 88 aaPredicted RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 TSPAN8P19075 237 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 SERPINB5P36952 375 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 SLC1A6P48664 564 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 ABCE1P61221 599 aaKnown RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 GNGT1P63211 74 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 CLCQ05315 142 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 BIRC2Q13490 618 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 TSTA3Q13630 321 aaPredicted RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 GTF2H2Q13888 395 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 SUZ12Q15022 739 aaKnown RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 CAPN13Q6MZZ7 669 aaPredicted RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 GTF2H2CQ6P1K8 395 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 ATG14Q6ZNE5 492 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 GOLGA7Q7Z5G4 137 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 THOC6Q86W42 341 aaKnown RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 ZNF761Q86XN6 746 aaPredicted RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 OR4K3Q96R72 315 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 SRMSQ9H3Y6 488 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 ZNF395Q9H8N7 513 aaPredicted RBP21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 ABCF3Q9NUQ8 709 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 THAP1Q9NVV9 213 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 OR6C2Q9NZP2 312 aa21.04■□□□□ 0.96
VCPKMT-204ENST00000491402 TCP11X1B4DZS4 312 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 LYPLA1O75608 230 aaPredicted RBP21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 CHRNGP07510 517 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 CD59P13987 128 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 CCND1P24385 295 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 LSP1P33241 339 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 SLC14A1Q13336 389 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 ARL13AQ5H913 290 aaPredicted RBP21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 SMPDL3AQ92484 453 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 TRMOQ9BU70 441 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 UCK1Q9HA47 277 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 SLCO1B3Q9NPD5 702 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 DNAJC11Q9NVH1 559 aa21.03■□□□□ 0.96
VCPKMT-204ENST00000491402 ANGPTL3Q9Y5C1 460 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms