RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PTERQ96BW5 349 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 NAPGQ99747 312 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 SPRTNQ9H040 489 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 EPN3Q9H201 632 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 FAM60AQ9NP50 221 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 PCYOX1Q9UHG3 505 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 NXT1Q9UKK6 140 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 CDYLQ9Y232 598 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 CRYL1Q9Y2S2 319 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 PTRH2Q9Y3E5 179 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 SAR1BQ9Y6B6 198 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 MGAQ8IWI9 3026 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 SPTA1P02549 2419 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 TTLL8A6PVC2 850 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 CCDC188H7C350 402 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 VPS4BO75351 444 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 IPO13O94829 963 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 ZIC2O95409 532 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 RPA3P35244 121 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 PTGIRP43119 386 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 GNG11P61952 73 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 PTK6Q13882 451 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 CYP2A13Q16696 494 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 LONRF1Q17RB8 773 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 ZNF789Q5FWF6 425 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 LRRC8EQ6NSJ5 796 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 TTLL10Q6ZVT0 673 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 TAX1BP1Q86VP1 789 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 VRK3Q8IV63 474 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 PPIL6Q8IXY8 311 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 C2orf73Q8N5S3 287 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 COG1Q8WTW3 980 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 SMPDL3AQ92484 453 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 LPGAT1Q92604 370 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 MS4A14Q96JA4 679 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 SELENOSQ9BQE4 189 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 FAM167BQ9BTA0 163 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 NAT9Q9BTE0 207 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 C20orf96Q9NUD7 363 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 GPR83Q9NYM4 423 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 KLHL42Q9P2K6 505 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 VPS4AQ9UN37 437 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 NEU2Q9Y3R4 380 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 PIEZO2Q9H5I5 2752 aa15.93■□□□□ 0.14
PDLIM2-217ENST00000491330 A0A1B0GX78 115 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 PRPF4O43172 522 aaKnown RBP eCLIP15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 USP1O94782 785 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 ENO3P13929 434 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 PAFAH1B1P43034 410 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 TSTA3Q13630 321 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 IL10RAQ13651 578 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 ARHGAP19Q14CB8 494 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 ZNF470Q6ECI4 717 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 TTC27Q6P3X3 843 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 FAM198BQ6UWH4 519 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 CILP2Q8IUL8 1156 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 LMNTD1Q8N9Z9 388 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 OR9A1PQ8NGU1 263 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 HMGCLL1Q8TB92 370 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 RUFY1Q96T51 708 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 SLAMF7Q9NQ25 335 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 DHCR7Q9UBM7 475 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 ASIC3Q9UHC3 531 aa15.92■□□□□ 0.14
PDLIM2-217ENST00000491330 GOLGA8KD6RF30 607 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 GOLGA8TH3BQL2 631 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 GOLGA8MH3BSY2 632 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 PYCARD-AS1I3L0S3 204 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 TXNDC9O14530 226 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 ZNF185O15231 689 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 ZBTB14O43829 449 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 AVILO75366 819 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 TTC4O95801 387 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 ALBP02768 609 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 CBSLP0DN79 551 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 CBSP35520 551 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 ZIC1Q15915 447 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 MICALCLQ6ZW33 695 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 NEK10Q6ZWH5 1172 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 OR2Y1Q8NGV0 311 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 LKAAEAR1Q8TD35 194 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 FKBP10Q96AY3 582 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 BIRC8Q96P09 236 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 IL17FQ96PD4 163 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 GBP5Q96PP8 586 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 MIPEPQ99797 713 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 EBNA1BP2Q99848 306 aaKnown RBP15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 CUTCQ9NTM9 273 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 C5AR2Q9P296 337 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 ANKMY1Q9P2S6 941 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 CDC14AQ9UNH5 594 aa15.91■□□□□ 0.14
PDLIM2-217ENST00000491330 A6NL46 340 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 NIPSNAP2O75323 286 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 DNAJB5O75953 348 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 TPBGLP0DKB5 382 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 SKIV2L2P42285 1042 aaKnown RBP15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 BDKRB1P46663 353 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 RGS4P49798 205 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 FOXK1P85037 733 aa15.9■□□□□ 0.14
PDLIM2-217ENST00000491330 OCA2Q04671 838 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms