RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 CRB3Q9BUF7 120 aa19.94■□□□□ 0.78
NELFE-210ENST00000491139 HEMGNQ9BXL5 484 aa19.94■□□□□ 0.78
NELFE-210ENST00000491139 ARNT2Q9HBZ2 717 aa19.94■□□□□ 0.78
NELFE-210ENST00000491139 ZNF160Q9HCG1 818 aa19.94■□□□□ 0.78
NELFE-210ENST00000491139 LUC7LQ9NQ29 371 aaKnown RBP19.94■□□□□ 0.78
NELFE-210ENST00000491139 PRSS21Q9Y6M0 314 aa19.94■□□□□ 0.78
NELFE-210ENST00000491139 SLC5A10A0PJK1 596 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 VSTM2BA6NLU5 285 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 APOC4-APOC2K7ER74 178 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 CCL21O00585 134 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 USP1O94782 785 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 STK10O94804 968 aaKnown RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 APOC2P02655 101 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 ACPPP15309 386 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 MCM3P25205 808 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 CARSP49589 748 aaKnown RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 RAB28P51157 221 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 SPARCL1Q14515 664 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 TCEAL1Q15170 157 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 FAM214AQ32MH5 1076 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 CCDC181Q5TID7 509 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 RPTNQ6XPR3 784 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 KBTBD2Q8IY47 623 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 METTL27Q8N6F8 245 aaPredicted RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 TTC29Q8NA56 475 aaPredicted RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 CCDC110Q8TBZ0 833 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 SLC22A18Q96BI1 424 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 CCDC42Q96M95 316 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 PPP1R2P1Q96PQ5 205 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 INTS7Q9NVH2 962 aaKnown RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 NLE1Q9NVX2 485 aaPredicted RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.93■□□□□ 0.78
NELFE-210ENST00000491139 ALG6Q9Y672 507 aa19.93■□□□□ 0.78
NELFE-210ENST00000491139 MAP2K7O14733 419 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 PKLRP30613 574 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 GRIA3P42263 894 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 TNFSF10P50591 281 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 NAPRTQ6XQN6 538 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 NLRP9Q7RTR0 991 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 CDKN2AIPNLQ96HQ2 116 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 CHP1Q99653 195 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 SELENOSQ9BQE4 189 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 MESP1Q9BRJ9 268 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 PLA2G3Q9NZ20 509 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 PTGFRNQ9P2B2 879 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 MAU2Q9Y6X3 613 aa19.92■□□□□ 0.78
NELFE-210ENST00000491139 UNC5CO95185 931 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 OCA2Q04671 838 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 KLC1Q07866 573 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 ITIH4Q14624 930 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.91■□□□□ 0.788e-9■■■■□ 19.8
NELFE-210ENST00000491139 DNAJC21Q5F1R6 531 aaKnown RBP19.91■□□□□ 0.78
NELFE-210ENST00000491139 FIGLAQ6QHK4 219 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 LINC01555Q8NAE3 123 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 RNF214Q8ND24 703 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 STT3BQ8TCJ2 826 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 HAS2Q92819 552 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 NHEJ1Q9H9Q4 299 aaPredicted RBP19.91■□□□□ 0.78
NELFE-210ENST00000491139 ENAMQ9NRM1 1142 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 INTUQ9ULD6 942 aa19.91■□□□□ 0.78
NELFE-210ENST00000491139 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.91■□□□□ 0.78
NELFE-210ENST00000491139 KCNN4O15554 427 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 S1PR4O95977 384 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 OR56A5P0C7T3 313 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 CD9P21926 228 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 FDXRP22570 491 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 CA7P43166 264 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 MARCKSL1P49006 195 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 SF1Q15637 639 aaKnown RBP19.9■□□□□ 0.78
NELFE-210ENST00000491139 PACS1Q6VY07 963 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 CDKL3Q8IVW4 592 aaPredicted RBP19.9■□□□□ 0.78
NELFE-210ENST00000491139 VSTM4Q8IW00 320 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 PRSS58Q8IYP2 241 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 C2orf73Q8N5S3 287 aaPredicted RBP19.9■□□□□ 0.78
NELFE-210ENST00000491139 ACTL9Q8TC94 416 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 STYXQ8WUJ0 223 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 MIEF2Q96C03 454 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 C8orf44Q96CB5 159 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 SPATA13Q96N96 652 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 ZNF285Q96NJ3 590 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 TRIM8Q9BZR9 551 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.9■□□□□ 0.78
NELFE-210ENST00000491139 GOLPH3Q9H4A6 298 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 ZNF304Q9HCX3 659 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 SEC14L3Q9UDX4 400 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 C3orf18Q9UK00 162 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 ZFHX3Q15911 3703 aa19.9■□□□□ 0.78
NELFE-210ENST00000491139 NSG1A0A0A6YYJ2 146 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 MACROD2A1Z1Q3 448 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 FITM1A5D6W6 292 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 CRYABP02511 175 aaKnown RBP19.89■□□□□ 0.77
NELFE-210ENST00000491139 UQCRHP07919 91 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 ZGLP1P0C6A0 271 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 PRR35P0CG20 571 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 TPH1P17752 444 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 SOX11P35716 441 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 ATG9BQ674R7 924 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 XKRXQ6PP77 449 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 NDUFAF7Q7L592 441 aa19.89■□□□□ 0.77
NELFE-210ENST00000491139 TAX1BP1Q86VP1 789 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms