RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CCDC71Q8IV32 467 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 REM2Q8IYK8 340 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 BRSK1Q8TDC3 778 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 FATE1Q969F0 183 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 MYOCQ99972 504 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 C1orf109Q9NX04 203 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 HECAQ9UBI9 543 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 ABCG2Q9UNQ0 655 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 NOD1Q9Y239 953 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 AP3M1Q9Y2T2 418 aa18.89■□□□□ 0.61
SNAPC3-206ENST00000490969 MYO1GB0I1T2 1018 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 FGF1P05230 155 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 CNPP09543 421 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 RACK1P63244 317 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 MRPS15P82914 257 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 ATG9BQ674R7 924 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 TRAF7Q6Q0C0 670 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 GATAD2AQ86YP4 633 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 C10orf111Q8N326 155 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 TEX26Q8N6G2 289 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 TBC1D20Q96BZ9 403 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 EHD3Q9NZN3 535 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 FNIP2Q9P278 1114 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 A0A1W2PQ45 241 aaPredicted RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 A0A1W2PQY0 241 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 SEC22BO75396 215 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 NDUFS3O75489 264 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 PGRP06401 933 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 PRKCAP17252 672 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 HLA-DPA1P20036 260 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 GRK4P32298 578 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 PGFP49763 221 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 KIAA1614Q5VZ46 1190 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 OR2T5Q6IEZ7 315 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 CALHM3Q86XJ0 350 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 UBQLNLQ8IYU4 475 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 OR4F6Q8NGB9 312 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 OR2T29Q8NH02 315 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 FAM120BQ96EK7 910 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 PPP3R2Q96LZ3 170 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 ADAM2Q99965 735 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 SEMA3CQ99985 751 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 NUAK2Q9H093 628 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 SLC6A13Q9NSD5 602 aa18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 CCDC59Q9P031 241 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-206ENST00000490969 CASTOR2A6NHX0 329 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 EVPLLA8MZ36 301 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 F8W810 466 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 FKTNO75072 461 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 SNX4O95219 450 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 MLLT6P55198 1093 aaPredicted RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 CHRNEQ04844 493 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 CDK10Q15131 360 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 PTPRNQ16849 979 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 TIGD6Q17RP2 521 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 ZFP69Q49AA0 526 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 SIDT2Q8NBJ9 832 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 LINGO1Q96FE5 620 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 DPY30Q9C005 99 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 ABCC13Q9NSE7 274 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 RAPGEFL1Q9UHV5 662 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 MKLN1Q9UL63 735 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 WBP11Q9Y2W2 641 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 TRBV5-3A0A0A0MS03 114 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 PCDHGA12O60330 932 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 POMCP01189 267 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 KRT6CP48668 564 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 CREMQ03060 361 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 PAN2Q504Q3 1202 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 PIK3R6Q5UE93 754 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 RTN4RL1Q86UN2 441 aaPredicted RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 PLPP6Q8IY26 295 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 KBTBD8Q8NFY9 601 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 EEF1AKMT1Q8WVE0 214 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 APH1BQ8WW43 257 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 DNASE1L2Q92874 299 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 POP5Q969H6 163 aaKnown RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 HMX1Q9NP08 348 aaPredicted RBP18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 SNX6Q9UNH7 406 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 PEX16Q9Y5Y5 336 aa18.87■□□□□ 0.61
SNAPC3-206ENST00000490969 TET1Q8NFU7 2136 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 ALX3O95076 343 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 IL6P05231 212 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 CKBP12277 381 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 GRK5P34947 590 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 GZMMP51124 257 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 DSC3Q14574 896 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 COPS4Q9BT78 406 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 PDP1Q9P0J1 537 aaPredicted RBP18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 CCL27Q9Y4X3 112 aa18.86■□□□□ 0.61
SNAPC3-206ENST00000490969 LOC100506127A0A0U1RQW1 187 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 OR7A17O14581 309 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 GPR182O15218 404 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 NIPSNAP2O75323 286 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 VPS26AO75436 327 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 ZNF682O95780 498 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 RPLP0P05388 317 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 PCSK1P29120 753 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms