RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NAPRTQ6XQN6 538 aa10□□□□□ -0.81
TTC28-207ENST00000490475 PCGF5Q86SE9 256 aa10□□□□□ -0.81
TTC28-207ENST00000490475 SLC38A9Q8NBW4 561 aa10□□□□□ -0.81
TTC28-207ENST00000490475 CLEC1AQ8NC01 280 aa10□□□□□ -0.81
TTC28-207ENST00000490475 PHC3Q8NDX5 983 aa10□□□□□ -0.81
TTC28-207ENST00000490475 ASZ1Q8WWH4 475 aa10□□□□□ -0.81
TTC28-207ENST00000490475 RAB11FIP5Q9BXF6 653 aa10□□□□□ -0.81
TTC28-207ENST00000490475 TRIM55Q9BYV6 548 aa10□□□□□ -0.81
TTC28-207ENST00000490475 AKIRIN1Q9H9L7 192 aaPredicted RBP10□□□□□ -0.81
TTC28-207ENST00000490475 LRRC4CQ9HCJ2 640 aa10□□□□□ -0.81
TTC28-207ENST00000490475 SLAMF7Q9NQ25 335 aa10□□□□□ -0.81
TTC28-207ENST00000490475 CATSPERZQ9NTU4 200 aa10□□□□□ -0.81
TTC28-207ENST00000490475 INTS7Q9NVH2 962 aaKnown RBP10□□□□□ -0.81
TTC28-207ENST00000490475 IL1RAPL1Q9NZN1 696 aa10□□□□□ -0.81
TTC28-207ENST00000490475 SAMD15Q9P1V8 674 aa10□□□□□ -0.81
TTC28-207ENST00000490475 NDOR1Q9UHB4 597 aa10□□□□□ -0.81
TTC28-207ENST00000490475 CDC23Q9UJX2 597 aa10□□□□□ -0.81
TTC28-207ENST00000490475 ANAPC5Q9UJX4 755 aa10□□□□□ -0.81
TTC28-207ENST00000490475 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
TTC28-207ENST00000490475 FAM237BA0A1B0GVD1 139 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 EFCAB8A8MWE9 144 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 KPNA5O15131 536 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 TP73O15350 636 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 ZSCAN9O15535 394 aaPredicted RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 RAD51CO43502 376 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 DNAJB5O75953 348 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 APOA4P06727 396 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 F7P08709 466 aaPredicted RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 CHRM5P08912 532 aaPredicted RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 ACADLP28330 430 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 FOLR3P41439 243 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 RPL21P46778 160 aaKnown RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 ITGA8P53708 1063 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 MLLT10P55197 1068 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 DCDP81605 110 aaKnown RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 DHX9Q08211 1270 aaKnown RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 PRKG2Q13237 762 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 NAA25Q14CX7 972 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 BRD3Q15059 726 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 TMED2Q15363 201 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 BBS9Q3SYG4 887 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 ZNF789Q5FWF6 425 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 YOD1Q5VVQ6 348 aaPredicted RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 HIBCHQ6NVY1 386 aaPredicted RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 FAM198BQ6UWH4 519 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 UNC5AQ6ZN44 842 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 CDHR3Q6ZTQ4 885 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 IGDCC3Q8IVU1 814 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 RAB42Q8N4Z0 105 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 GSDMBQ8TAX9 411 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 PNPLA2Q96AD5 504 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 ZNF669Q96BR6 464 aaPredicted RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 SNF8Q96H20 258 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 SMAD5Q99717 465 aaKnown RBP9.99□□□□□ -0.81
TTC28-207ENST00000490475 ERP44Q9BS26 406 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 NDC1Q9BTX1 674 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 PLCL2Q9UPR0 1127 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 MAP4K5Q9Y4K4 846 aa9.99□□□□□ -0.81
TTC28-207ENST00000490475 TNRC6AQ8NDV7 1962 aaKnown RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 ZCWPW2A0A1B0GU75 182 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 SLC5A10A0PJK1 596 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 IQCF5A8MTL0 148 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 K7EM74 188 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 PFDN6O15212 129 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 NDUFS3O75489 264 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 SORBS2O94875 1100 aaKnown RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 SEC31AO94979 1220 aaKnown RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 AGFG2O95081 481 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 DDAH2O95865 285 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 S1PR4O95977 384 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 CAPN1P07384 714 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 UGT2B7P16662 529 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 ITGAXP20702 1163 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 TTPAP49638 278 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 RAB28P51157 221 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 CBX1P83916 185 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 MORF4L2Q15014 288 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 TRADDQ15628 312 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 ZC3H12BQ5HYM0 836 aaKnown RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 TCTE1Q5JU00 501 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 CPZQ66K79 652 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 KIAA0930Q6ICG6 404 aaPredicted RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 NEPROQ6NW34 567 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 JMJD6Q6NYC1 403 aaPredicted RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 FBXO38Q6PIJ6 1188 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 UNC5DQ6UXZ4 953 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 ZNF572Q7Z3I7 529 aaPredicted RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 MAATS1Q7Z4T9 603 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 SDCCAG8Q86SQ7 713 aaPredicted RBP9.98□□□□□ -0.81
TTC28-207ENST00000490475 DCUN1D3Q8IWE4 304 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 OTUD6BQ8N6M0 293 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 OR5AR1Q8NGP9 310 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 OR2Y1Q8NGV0 311 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 MAGEC3Q8TD91 643 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 PTERQ96BW5 349 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 RNF31Q96EP0 1072 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 PPM1MQ96MI6 270 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 PSMG3-AS1Q96PY0 264 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 PANX3Q96QZ0 392 aa9.98□□□□□ -0.81
TTC28-207ENST00000490475 OR2A14Q96R47 310 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms