RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 CDH3P22223 829 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 TCEA1P23193 301 aaKnown RBP3.56□□□□□ -1.84
CD46-216ENST00000490278 PSMA3P25788 255 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 GP5P40197 560 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 MAZP56270 477 aaKnown RBP3.56□□□□□ -1.84
CD46-216ENST00000490278 UBASH3AP57075 661 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 HERV-K104P61576 105 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 KLC1Q07866 573 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 TAF10Q12962 218 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 GPR17Q13304 367 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 P2RY6Q15077 328 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 NPTX1Q15818 432 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 ARMC3Q5W041 872 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 TRAT1Q6PIZ9 186 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 C11orf57Q6ZUT1 292 aaPredicted RBP3.56□□□□□ -1.84
CD46-216ENST00000490278 SH2D5Q6ZV89 423 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 KRT77Q7Z794 578 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 METTL23Q86XA0 190 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 MMD2Q8IY49 270 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 LGI2Q8N0V4 545 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 EID3Q8N140 333 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 ZNF843Q8N446 348 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 RYBPQ8N488 228 aaPredicted RBP3.56□□□□□ -1.84
CD46-216ENST00000490278 ANKRD13CQ8N6S4 541 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 OR4K1Q8NGD4 311 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 OR52N5Q8NH56 324 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 VANGL1Q8TAA9 524 aaPredicted RBP3.56□□□□□ -1.84
CD46-216ENST00000490278 PIGBQ92521 554 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 SPATA17Q96L03 361 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 FERMT1Q9BQL6 677 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 MGME1Q9BQP7 344 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 FN3KQ9H479 309 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 SLC52A3Q9NQ40 469 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 TXNDC16Q9P2K2 825 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 STUB1Q9UNE7 303 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 WDR83OSQ9Y284 106 aa3.56□□□□□ -1.84
CD46-216ENST00000490278 A0A087WYN8 130 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 A0A1W2PPK0 400 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 C2orf81A6NN90 581 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 ZNF197O14709 1029 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 CLPTM1O96005 669 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 NGFP01138 241 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 PRSS56P0CW18 603 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 PDGFRAP16234 1089 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 ACAT1P24752 427 aaKnown RBP3.55□□□□□ -1.84
CD46-216ENST00000490278 CSTF2P33240 577 aaKnown RBP eCLIP3.55□□□□□ -1.84
CD46-216ENST00000490278 CAPZA1P52907 286 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 TUBB4BP68371 445 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 KCNJ10P78508 379 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 DLK1P80370 383 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 PHKG1Q16816 387 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 KRTAP24-1Q3LI83 254 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 C20orf194Q5TEA3 1177 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 ENPP7Q6UWV6 458 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 FAM47EQ6ZV65 393 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 SLC16A9Q7RTY1 509 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 ABI3BPQ7Z7G0 1075 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 APLFQ8IW19 511 aaPredicted RBP3.55□□□□□ -1.84
CD46-216ENST00000490278 NDUFAF2Q8N183 169 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 TRIM58Q8NG06 486 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 PROX1Q92786 737 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 FBXO17Q96EF6 278 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 FAM71F1Q96KD3 344 aaPredicted RBP3.55□□□□□ -1.84
CD46-216ENST00000490278 KATNB1Q9BVA0 655 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 SLC2A11Q9BYW1 496 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 OR2B2Q9GZK3 357 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 Q9H8V8 135 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 XAB2Q9HCS7 855 aaKnown RBP3.55□□□□□ -1.84
CD46-216ENST00000490278 DNAJC4Q9NNZ3 241 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 FAM207AQ9NSI2 230 aaPredicted RBP3.55□□□□□ -1.84
CD46-216ENST00000490278 P4HTMQ9NXG6 502 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 ZNF112Q9UJU3 913 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 SNX7Q9UNH6 387 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 KIAA1210Q9ULL0 1709 aa3.55□□□□□ -1.84
CD46-216ENST00000490278 STK36Q9NRP7 1315 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 A0A087WV48 116 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 ARHGEF37A1IGU5 675 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 CASTOR2A6NHX0 329 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 RPS6KA5O75582 802 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 DFFBO76075 338 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 AMBPP02760 352 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 CD48P09326 243 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 MYL6BP14649 208 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 CHRNB4P30926 498 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 HSD17B3P37058 310 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 RPL21P46778 160 aaKnown RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 CLDN15P56746 228 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 CDR2Q01850 454 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 PPARDQ03181 441 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 GTDC1Q4AE62 458 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 SLC35D3Q5M8T2 416 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 ARHGEF16Q5VV41 709 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 DCLRE1AQ6PJP8 1040 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 MOXD1Q6UVY6 613 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 PET117Q6UWS5 81 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 GALNTL5Q7Z4T8 443 aa3.54□□□□□ -1.84
CD46-216ENST00000490278 DNAJB7Q7Z6W7 309 aaPredicted RBP3.54□□□□□ -1.84
CD46-216ENST00000490278 PIGZQ86VD9 579 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms