RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ELOCQ15369 112 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 IYDQ6PHW0 289 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 FOXR1Q6PIV2 292 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 OR52E1Q8NGJ3 308 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 TWIST2Q8WVJ9 160 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 RILPQ96NA2 401 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 KIR3DX1Q9H7L2 352 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 ZSCAN32Q9NX65 697 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 GPRC5BQ9NZH0 403 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 SPASTQ9UBP0 616 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 HEY2Q9UBP5 337 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 TIMM22Q9Y584 194 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 DNAJC15Q9Y5T4 150 aa20.23■□□□□ 0.83
SND1-214ENST00000489417 TRBV23OR9-2A0A075B6M9 112 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 PRAMEF33A0A0G2JMD5 474 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 OR5K4A6NMS3 321 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 EBAG9O00559 213 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 CLGNO14967 610 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 CLDN9O95484 217 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 CHEK2O96017 543 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 CAPN1P07384 714 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 SP9P0CG40 484 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 RAB28P51157 221 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 INHBCP55103 352 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 HNRNPKP61978 463 aaKnown RBP eCLIP20.22■□□□□ 0.83
SND1-214ENST00000489417 CHCHD4Q8N4Q1 142 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 METTL6Q8TCB7 284 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 LMX1AQ8TE12 382 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 SMPDL3AQ92484 453 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 ZC3H10Q96K80 434 aaKnown RBP20.22■□□□□ 0.83
SND1-214ENST00000489417 PPP1R36Q96LQ0 422 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 NRTNQ99748 197 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 MIPEPQ99797 713 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 MEAF6Q9HAF1 191 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 RNF11Q9Y3C5 154 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 DYRK1BQ9Y463 629 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 KCNE2Q9Y6J6 123 aa20.22■□□□□ 0.83
SND1-214ENST00000489417 KIR2DS5A0A0G2JLQ3 304 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 A0A0G2JNG1 304 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 KIR2DS3K7RE56 304 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 SDHDO14521 159 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 DCTN3O75935 186 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 HMOX2P30519 316 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 TUBB3Q13509 450 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 KIR2DS5Q14953 304 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 GGTA1PQ4G0N0 100 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 PRAMEF14Q5SWL7 426 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 PRAMEF13Q5VWM6 474 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 SUSD1Q6UWL2 747 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 ACAD11Q709F0 780 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 GKN2Q86XP6 184 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 MYLK4Q86YV6 388 aaPredicted RBP20.21■□□□□ 0.83
SND1-214ENST00000489417 TRIM48Q8IWZ4 208 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 L3MBTL4Q8NA19 623 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 FAM46DQ8NEK8 389 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 OR2L8Q8NGY9 312 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 SETD7Q8WTS6 366 aaKnown RBP20.21■□□□□ 0.83
SND1-214ENST00000489417 MAGEB10Q96LZ2 347 aaPredicted RBP20.21■□□□□ 0.83
SND1-214ENST00000489417 SLC29A3Q9BZD2 475 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 XKR8Q9H6D3 395 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 WDR55Q9H6Y2 383 aaPredicted RBP20.21■□□□□ 0.83
SND1-214ENST00000489417 ERVMER34-1Q9H9K5 563 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 PILRBQ9UKJ0 227 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 ICKQ9UPZ9 632 aa20.21■□□□□ 0.83
SND1-214ENST00000489417 TNRC6BQ9UPQ9 1833 aaKnown RBP20.21■□□□□ 0.83
SND1-214ENST00000489417 GOLGA8QA0A0J9YX86 632 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 GOLGA8OA6NCC3 632 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 E7EQ34 232 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 GOLGA8NF8WBI6 632 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 PIP5K1BO14986 540 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 PRAMEF4O60810 478 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 NPPBP16860 134 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 XRCC1P18887 633 aaPredicted RBP20.2■□□□□ 0.82
SND1-214ENST00000489417 CTSKP43235 329 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 IRF8Q02556 426 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 PCDH1Q08174 1060 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 CHIT1Q13231 466 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 ANGPT1Q15389 498 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 ZSCAN26Q16670 478 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 THEMIS2Q5TEJ8 643 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 PRAMEF9Q5VWM5 478 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 LCTLQ6UWM7 567 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 C6orf89Q6UWU4 347 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 ALYREFQ86V81 257 aaKnown RBP20.2■□□□□ 0.82
SND1-214ENST00000489417 HOMEZQ8IX15 550 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 C2orf73Q8N5S3 287 aaPredicted RBP20.2■□□□□ 0.82
SND1-214ENST00000489417 ZNF548Q8NEK5 533 aaPredicted RBP20.2■□□□□ 0.82
SND1-214ENST00000489417 HMGCLL1Q8TB92 370 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 ZDHHC1Q8WTX9 485 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 C19orf60Q96EN9 201 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 MAELQ96JY0 434 aaKnown RBP20.2■□□□□ 0.82
SND1-214ENST00000489417 OR52B2Q96RD2 323 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 CCDC28BQ9BUN5 200 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 TUBB1Q9H4B7 451 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 TCF7L2Q9NQB0 619 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 TMEM74BQ9NUR3 256 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 BTRCQ9Y297 605 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 FANCMQ8IYD8 2048 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 BDP1A6H8Y1 2624 aa20.2■□□□□ 0.82
SND1-214ENST00000489417 HGSO14964 777 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms