RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PCDHGA9Q9Y5G4 932 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 ANKRD12Q6UB98 2062 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 SPENQ96T58 3664 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 NUP210LQ5VU65 1888 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 PCM1Q15154 2024 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 FAM237BA0A1B0GVD1 139 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 PRICKLE3O43900 615 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-213ENST00000489045 KLF7O75840 302 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-213ENST00000489045 CHRM3P20309 590 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 PSMB5P28074 263 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 ATP5DP30049 168 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 OTX2P32243 289 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 PGDP52209 483 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 FOXK1P85037 733 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 ATP1A4Q13733 1029 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 SLC9A5Q14940 896 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 IGFBP7Q16270 282 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 NKAIN1Q4KMZ8 207 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 ANKRD20A4Q4UJ75 823 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 FIGLAQ6QHK4 219 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 RAB43Q86YS6 212 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 MCATQ8IVS2 390 aaKnown RBP22.1■■□□□ 1.13
COL9A3-213ENST00000489045 RAB42Q8N4Z0 105 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 DENND1AQ8TEH3 1009 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 OSBPL9Q96SU4 736 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 IFT80Q9P2H3 777 aaPredicted RBP22.1■■□□□ 1.13
COL9A3-213ENST00000489045 GALPQ9UBC7 116 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 NDOR1Q9UHB4 597 aa22.1■■□□□ 1.13
COL9A3-213ENST00000489045 HECTD1Q9ULT8 2610 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 SDR42E2A6NKP2 422 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 PHF2O75151 1096 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 F7P08709 466 aaPredicted RBP22.09■■□□□ 1.13
COL9A3-213ENST00000489045 PKMP14618 531 aaKnown RBP22.09■■□□□ 1.13
COL9A3-213ENST00000489045 ZNF470Q6ECI4 717 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 HMGCLL1Q8TB92 370 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 DLG3Q92796 817 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 MLXIPLQ9NP71 852 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 INTS10Q9NVR2 710 aaKnown RBP22.09■■□□□ 1.13
COL9A3-213ENST00000489045 VPS9D1Q9Y2B5 631 aa22.09■■□□□ 1.13
COL9A3-213ENST00000489045 PTRH2Q9Y3E5 179 aaKnown RBP22.09■■□□□ 1.13
COL9A3-213ENST00000489045 MAGEB16A2A368 324 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 E5RI56 91 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 CEACAM4O75871 244 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 FKBP9O95302 570 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 MATN4O95460 622 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 FOLR3P41439 243 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 GRIA3P42263 894 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 GCGRP47871 477 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 THOC5Q13769 683 aaKnown RBP22.08■■□□□ 1.13
COL9A3-213ENST00000489045 ACSBG2Q5FVE4 666 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 ZC3H12BQ5HYM0 836 aaKnown RBP22.08■■□□□ 1.13
COL9A3-213ENST00000489045 MED25Q71SY5 747 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 TMEM102Q8N9M5 508 aaPredicted RBP22.08■■□□□ 1.13
COL9A3-213ENST00000489045 MAGEC3Q8TD91 643 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 ACTRT1Q8TDG2 376 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 MIPEPQ99797 713 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 GRPEL1Q9HAV7 217 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 SPATA7Q9P0W8 599 aa22.08■■□□□ 1.13
COL9A3-213ENST00000489045 ZCWPW2A0A1B0GU75 182 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 CTAGE9A4FU28 777 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 ZNF185O15231 689 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 CNOT3O75175 753 aaKnown RBP22.07■■□□□ 1.12
COL9A3-213ENST00000489045 ALAS2P22557 587 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 MCM3P25205 808 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 MAGEA3P43357 314 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 FNTAP49354 379 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 RRADP55042 308 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 FOXL2P58012 376 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.07■■□□□ 1.12
COL9A3-213ENST00000489045 TTLL10Q6ZVT0 673 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 MRGPREQ86SM8 312 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 DENND6AQ8IWF6 608 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 AGGF1Q8N302 714 aaeCLIP22.07■■□□□ 1.12
COL9A3-213ENST00000489045 NAT8LQ8N9F0 302 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 GRK7Q8WTQ7 553 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 FBXO6Q9NRD1 293 aaPredicted RBP22.07■■□□□ 1.12
COL9A3-213ENST00000489045 PTPN13Q12923 2485 aa22.07■■□□□ 1.12
COL9A3-213ENST00000489045 GOLGA6L10A0A0M3HER8 536 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 A0A1B0GX78 115 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 A0A1W2PPV9 198 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 ARHGEF33A8MVX0 844 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 TARM1B6A8C7 271 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 ZSCAN12O43309 604 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 KIF5CO60282 957 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 USP1O94782 785 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 CD63P08962 238 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 ARSFP54793 590 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 MLLT10P55197 1068 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 CTBP1Q13363 440 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 FASTKQ14296 549 aaKnown RBP22.06■■□□□ 1.12
COL9A3-213ENST00000489045 SSPNQ14714 243 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 CYP2A13Q16696 494 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 KLHL38Q2WGJ6 581 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 PAPD7Q5XG87 772 aaKnown RBP22.06■■□□□ 1.12
COL9A3-213ENST00000489045 MRPL14Q6P1L8 145 aaKnown RBP22.06■■□□□ 1.12
COL9A3-213ENST00000489045 FDCSPQ8NFU4 85 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 OR2L3Q8NG85 312 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 OR2Y1Q8NGV0 311 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 ZUFSPQ96AP4 578 aa22.06■■□□□ 1.12
COL9A3-213ENST00000489045 SLC30A3Q99726 388 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms