RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 FAM221BA6H8Z2 402 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 LRRC14BA6NHZ5 514 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 TARM1B6A8C7 271 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 G3V2L1 256 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 BTN3A3O00478 584 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 TAPBPO15533 448 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ZW10O43264 779 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 DLX3O60479 287 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 SIX3O95343 332 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 RPLP0P05388 317 aaKnown RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 CHRM5P08912 532 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ERGP11308 486 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 NEFHP12036 1026 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ALDH3A1P30838 453 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 HSD17B2P37059 387 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 GPR3P46089 330 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 CAPZBP47756 277 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 EPHA4P54764 986 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 MPP2Q14168 576 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ARHGAP19Q14CB8 494 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 CYP2A13Q16696 494 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 PTCHD3Q3KNS1 767 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 PRAMEF13Q5VWM6 474 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 IRGCQ6NXR0 463 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 SLC22A9Q8IVM8 553 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 C10orf107Q8IVU9 208 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 SNX31Q8N9S9 440 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 DEFB124Q8NES8 71 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 BAHD1Q8TBE0 780 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 MDM1Q8TC05 714 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 NETO1Q8TDF5 533 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 TMEM237Q96Q45 408 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 CDC6Q99741 560 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ACAT2Q9BWD1 397 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 CNOT10Q9H9A5 744 aaKnown RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ACSS2Q9NR19 701 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 HRASLS2Q9NWW9 162 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 SPHK1Q9NYA1 384 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ACTR10Q9NZ32 417 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 OR6C2Q9NZP2 312 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 TAC3Q9UHF0 121 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 PTBP2Q9UKA9 531 aaKnown RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ASB1Q9Y576 335 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 COL27A1Q8IZC6 1860 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 IGHV1OR21-1A0A087WYE8 117 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 OR5K3A6NET4 321 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 C2orf74A8MZ97 194 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 E7ENX8 843 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 STX16-NPEPL1H3BU86 382 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 STX16O14662 325 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CASC3O15234 703 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 TNFSF14O43557 240 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 KLK8O60259 260 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CBFA2T3O75081 653 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 IPO13O94829 963 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 BPGMP07738 259 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CHN1P15882 459 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 PNLIPP16233 465 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 ACP1P24666 158 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 OAS2P29728 719 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 PEBP1P30086 187 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 GDF5P43026 501 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 ETV4P43268 484 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 SERPINB4P48594 390 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 ACADVLP49748 655 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 ATP1A2P50993 1020 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 LIMK1P53667 647 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 PPP1CAP62136 330 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CCL7P80098 99 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 NFKB2Q00653 900 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 TAP2Q03519 686 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 NR1D2Q14995 579 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CDKL4Q5MAI5 379 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 LIPMQ5VYY2 423 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CAPN13Q6MZZ7 669 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 KLHL35Q6PF15 583 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 RPS27LQ71UM5 84 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 LRRC70Q7Z2Q7 622 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 TRIM73Q86UV7 250 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 THOC6Q86W42 341 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 ADGRF3Q8IZF5 1079 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CCNYL1Q8N7R7 359 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 PPP1R14CQ8TAE6 165 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 UBTD2Q8WUN7 234 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 DYDC1Q8WWB3 177 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 SREK1Q8WXA9 508 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 NCSTNQ92542 709 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CCDC126Q96EE4 140 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 TGM7Q96PF1 710 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 MIPEPQ99797 713 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CD244Q9BZW8 370 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 SLC32A1Q9H598 525 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 OGFRQ9NZT2 677 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 OPTCQ9UBM4 332 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 KLHL3Q9UH77 587 aa11.91□□□□□ -0.5
TRAIP-209ENST00000488860 CDV3Q9UKY7 258 aaKnown RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 ATXN7L1Q9ULK2 861 aaPredicted RBP11.91□□□□□ -0.5
TRAIP-209ENST00000488860 DYRK1BQ9Y463 629 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms