RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 SLC44A1Q8WWI5 657 aa18■□□□□ 0.47
PTCD3-217ENST00000488801 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18■□□□□ 0.47
PTCD3-217ENST00000488801 UBXN10Q96LJ8 280 aa18■□□□□ 0.47
PTCD3-217ENST00000488801 TEFMQ96QE5 360 aaKnown RBP18■□□□□ 0.47
PTCD3-217ENST00000488801 CAB39LQ9H9S4 337 aa18■□□□□ 0.47
PTCD3-217ENST00000488801 PARVBQ9HBI1 364 aa18■□□□□ 0.47
PTCD3-217ENST00000488801 SLC39A1Q9NY26 324 aa18■□□□□ 0.47
PTCD3-217ENST00000488801 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
PTCD3-217ENST00000488801 NOVA2Q9UNW9 492 aaKnown RBP18■□□□□ 0.47
PTCD3-217ENST00000488801 NUP210LQ5VU65 1888 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 CFAP47Q6ZTR5 3102 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 ZBTB14O43829 449 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 EBLN1P0CF75 366 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 FGF5P12034 268 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 PVRP15151 417 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 FOLR1P15328 257 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 DEKP35659 375 aaKnown RBP17.99■□□□□ 0.47
PTCD3-217ENST00000488801 HSD17B2P37059 387 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 KCNAB1Q14722 419 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 ZIC1Q15915 447 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 DTX1Q86Y01 620 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 RAB42Q8N4Z0 105 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 NKAPQ8N5F7 415 aaKnown RBP17.99■□□□□ 0.47
PTCD3-217ENST00000488801 OR2A1Q8NGT9 310 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 ISL2Q96A47 359 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 SLC22A18Q96BI1 424 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 TSPAN17Q96FV3 270 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 ZPBPQ9BS86 351 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 DHRS4Q9BTZ2 278 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 SYTL2Q9HCH5 934 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 ZMIZ1Q9ULJ6 1067 aa17.99■□□□□ 0.47
PTCD3-217ENST00000488801 A0A087WV48 116 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 E7ENX8 843 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 PHGDHO43175 533 aaKnown RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 RIPK2O43353 540 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 ENO2P09104 434 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 SLC35E2BP0CK96 405 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 PSMB5P28074 263 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 OAS2P29728 719 aaKnown RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 EIF2S3P41091 472 aaKnown RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 PNLIPRP1P54315 467 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 RAB10P61026 200 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 TUBB4BP68371 445 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 TAP2Q03519 686 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 IL11RAQ14626 422 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 USP10Q14694 798 aaKnown RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 ZXDCQ2QGD7 858 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 DCAF12Q5T6F0 453 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 CEACAM20Q6UY09 585 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 TAX1BP1Q86VP1 789 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 C19orf47Q8N9M1 422 aaKnown RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 ZNF501Q96CX3 271 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 PAFAH2Q99487 392 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 ASPSCR1Q9BZE9 553 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 DERL2Q9GZP9 239 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 GPAMQ9HCL2 828 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 STOX2Q9P2F5 926 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 LNPEPQ9UIQ6 1025 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 RAXQ9Y2V3 346 aa17.98■□□□□ 0.47
PTCD3-217ENST00000488801 TMEM184BQ9Y519 407 aaPredicted RBP17.98■□□□□ 0.47
PTCD3-217ENST00000488801 ITPR1Q14643 2758 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 A0A087WUV0 522 aaPredicted RBP17.97■□□□□ 0.47
PTCD3-217ENST00000488801 ISM1B1AKI9 464 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 H3BMH7 237 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 DLGAP3O95886 979 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 STMN1P16949 149 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 CYP2A7P20853 494 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 SAT1P21673 171 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 MAP4P27816 1152 aaKnown RBP17.97■□□□□ 0.47
PTCD3-217ENST00000488801 GCAP28676 217 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 MAGEA12P43365 314 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 PMS2P54278 862 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 AP1S2P56377 157 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 ACY1Q03154 408 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 TUBB3Q13509 450 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.97■□□□□ 0.47
PTCD3-217ENST00000488801 TMEM164Q5U3C3 297 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 MBOAT1Q6ZNC8 495 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 CDHR3Q6ZTQ4 885 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 CMC1Q7Z7K0 106 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 C2orf73Q8N5S3 287 aaPredicted RBP17.97■□□□□ 0.47
PTCD3-217ENST00000488801 OR2L3Q8NG85 312 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 SMPDL3AQ92484 453 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 CCDC138Q96M89 665 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 OR6C1Q96RD1 312 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 FAM60AQ9NP50 221 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 ENAMQ9NRM1 1142 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 FGF21Q9NSA1 209 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 ZNF180Q9UJW8 692 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 CACNA1GO43497 2377 aa17.97■□□□□ 0.47
PTCD3-217ENST00000488801 SRRM3A6NNA2 597 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-217ENST00000488801 ZNF839A8K0R7 811 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 POLR1CO15160 346 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-217ENST00000488801 MAGP20916 626 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 KIAA1614Q5VZ46 1190 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 FCRL6Q6DN72 434 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 CYB5D1Q6P9G0 228 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 BPHLQ86WA6 291 aaPredicted RBP17.96■□□□□ 0.47
PTCD3-217ENST00000488801 FAM20CQ8IXL6 584 aa17.96■□□□□ 0.47
PTCD3-217ENST00000488801 ZNF248Q8NDW4 579 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms