RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 UNC5DQ6UXZ4 953 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 FAM124AQ86V42 546 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 CDYL2Q8N8U2 506 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 METTL6Q8TCB7 284 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 TOE1Q96GM8 510 aaKnown RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 C3orf30Q96M34 536 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 AKTIPQ9H8T0 292 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 DNAJC11Q9NVH1 559 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 TIMM22Q9Y584 194 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 COPG1Q9Y678 874 aaKnown RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 FRYQ5TBA9 3013 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 KCNJ13O60928 360 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 WDR47O94967 919 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 CAPN1P07384 714 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 EZRP15311 586 aaKnown RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 PIK3R1P27986 724 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 ACADLP28330 430 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 HMOX2P30519 316 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 MAT2AP31153 395 aaKnown RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 KCNJ2P63252 427 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 DMPKQ09013 629 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 PLA2G4EQ3MJ16 856 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 LYSMD4Q5XG99 296 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 OGFOD2Q6N063 350 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 PDZD3Q86UT5 571 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 KIF2BQ8N4N8 673 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 OR2I1PQ8NGU4 316 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 MAGEC3Q8TD91 643 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 HSPA12BQ96MM6 686 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 CDK15Q96Q40 435 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 TIMM29Q9BSF4 260 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 APOOQ9BUR5 198 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 EDEM2Q9BV94 578 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 SLC29A3Q9BZD2 475 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 C1orf21Q9H246 121 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 OR52A5Q9H2C5 316 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 WSB2Q9NYS7 404 aaPredicted RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 STOX2Q9P2F5 926 aaPredicted RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 POLG2Q9UHN1 485 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 BTRCQ9Y297 605 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 SLC17A4Q9Y2C5 497 aa12.36□□□□□ -0.43
NELFE-209ENST00000488426 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
NELFE-209ENST00000488426 CHD8Q9HCK8 2581 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 PCNX2A6NKB5 2137 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 ATP6AP2A0A1C7CYW4 349 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 SLC31A1O15431 190 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 GYG2O15488 501 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 ZNF217O75362 1048 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 ATP6AP2O75787 350 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 LINC00032P0C843 101 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 PRR35P0CG20 571 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 THRAP10827 490 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 LBPP18428 481 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 ACSL1P33121 698 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 BDKRB1P46663 353 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 KIAA1024LP59773 190 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 ZXDCQ2QGD7 858 aaPredicted RBP12.35□□□□□ -0.43
NELFE-209ENST00000488426 GGTA1PQ4G0N0 100 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 METRNLQ641Q3 311 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 AGTRAPQ6RW13 159 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 FAM83HQ6ZRV2 1179 aaPredicted RBP12.35□□□□□ -0.43
NELFE-209ENST00000488426 RINLQ6ZS11 566 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 C11orf74Q86VG3 221 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 SYT12Q8IV01 421 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 SNX31Q8N9S9 440 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 TUBGCP3Q96CW5 907 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 GPR174Q9BXC1 333 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 TBC1D10AQ9BXI6 508 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 TAS2R1Q9NYW7 299 aa12.35□□□□□ -0.43
NELFE-209ENST00000488426 B2RBV5 119 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 C10orf142B7Z368 130 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 KHNYNO15037 678 aaKnown RBP12.34□□□□□ -0.43
NELFE-209ENST00000488426 CLDN9O95484 217 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 COX4I1P13073 169 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 EPORP19235 508 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 HNRNPA2B1P22626 353 aaKnown RBP12.34□□□□□ -0.43
NELFE-209ENST00000488426 CD6P30203 668 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 LIMK1P53667 647 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 PFN3P60673 137 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 DNAL1Q4LDG9 190 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 SPATA19Q7Z5L4 167 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 RP9Q8TA86 221 aaKnown RBP12.34□□□□□ -0.43
NELFE-209ENST00000488426 SCARF2Q96GP6 870 aaPredicted RBP12.34□□□□□ -0.43
NELFE-209ENST00000488426 PKP4Q99569 1192 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 ZDHHC5Q9C0B5 715 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 ACTR8Q9H981 624 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 SLC23A2Q9UGH3 650 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 ZNHIT2Q9UHR6 403 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 ACSL5Q9ULC5 683 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 SUFUQ9UMX1 484 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 G3BP2Q9UN86 482 aaKnown RBP12.34□□□□□ -0.43
NELFE-209ENST00000488426 PRKAB1Q9Y478 270 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 PTGDR2Q9Y5Y4 395 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 FPGTO14772 594 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 LATO43561 262 aa12.34□□□□□ -0.43
NELFE-209ENST00000488426 UGDHO60701 494 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms