RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 FRA10AC1Q70Z53 315 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 CACTIN-AS1Q8N1I8 211 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 MREGQ8N565 214 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 AGBL5Q8NDL9 886 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 WDR36Q8NI36 951 aaKnown RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 MCOLN3Q8TDD5 553 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 MZB1Q8WU39 189 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 NXPE2Q96DL1 559 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 RNF31Q96EP0 1072 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 OR2A14Q96R47 310 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 CD180Q99467 661 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ACAT2Q9BWD1 397 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 PITPNM3Q9BZ71 974 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 TWSG1Q9GZX9 223 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ZNF768Q9H5H4 540 aaKnown RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ALG9Q9H6U8 611 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 OCIAD1Q9NX40 245 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 SOHLH2Q9NX45 425 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 SIDT1Q9NXL6 827 aaKnown RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 TAC3Q9UHF0 121 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 LNPEPQ9UIQ6 1025 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ACOT9Q9Y305 439 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 FREM2Q5SZK8 3169 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 A0A0J9YY10 115 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 TRABD2BA6NFA1 517 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NCF1BA6NI72 391 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 SLC9B1P1A6NJY1 282 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 EFCAB7A8K855 629 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NCF1CA8MVU1 366 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 E7ENX8 843 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 TMX2-CTNND1H3BSU7 103 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NRP2O60462 931 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 BRINP1O60477 761 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ENO2P09104 434 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 LTA4HP09960 611 aaKnown RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NUDT17P0C025 328 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 JMJD7P0C870 316 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 EBLN1P0CF75 366 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NCF1P14598 390 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 TFEBP19484 476 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 MAGP20916 626 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 CSTF2P33240 577 aaKnown RBP eCLIP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 MAPK10P53779 464 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 AP1S2P56377 157 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ATP6V0D1P61421 351 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 YBX1P67809 324 aaKnown RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 TAP2Q03519 686 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 KIR2DS3Q14952 304 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ARHGAP19Q14CB8 494 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ZXDCQ2QGD7 858 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 DEFB110Q30KQ9 67 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 C18orf21Q32NC0 220 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 AGTRAPQ6RW13 159 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 LRRC56Q8IYG6 542 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 PLD6Q8N2A8 252 aaKnown RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 FBXO39Q8N4B4 442 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 HMGCLL1Q8TB92 370 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 SMPDL3AQ92484 453 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 GATA6Q92908 595 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ALKBH8Q96BT7 664 aaKnown RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ZBTB9Q96C00 473 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NXNL1Q96CM4 212 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 GRAMD1AQ96CP6 724 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 MED8Q96G25 268 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 PRR11Q96HE9 360 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 SLC41A2Q96JW4 573 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 CCDC138Q96M89 665 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 CMKLR1Q99788 373 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 MIPEPQ99797 713 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 EGFL8Q99944 293 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 CCDC77Q9BR77 488 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ATG10Q9H0Y0 220 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 POLR1BQ9H9Y6 1135 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 CCDC177Q9NQR7 707 aaPredicted RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 ZNF358Q9NW07 568 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 EURLQ9NYK6 297 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 TLK1Q9UKI8 766 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 NOVA2Q9UNW9 492 aaKnown RBP10.66□□□□□ -0.7
UBE4B-210ENST00000488228 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 PLAAQ9Y263 795 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 OARD1Q9Y530 152 aa10.66□□□□□ -0.7
UBE4B-210ENST00000488228 IQANK1A0A1B0GTG1 560 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 ZNF839A8K0R7 811 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 SUPT3HB4E1H0 165 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 GOLGA8RI6L899 631 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 TOX3O15405 576 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 PRICKLE3O43900 615 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 SUPT3HO75486 399 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 RFPL1O75677 317 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 KLHL2O95198 593 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 ZBTB11O95625 1053 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 TUBBP07437 444 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 HIST1H2AGP0C0S8 130 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 FGF3P11487 239 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 NELFEP18615 380 aaKnown RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 HIST1H2ADP20671 130 aa10.65□□□□□ -0.7
UBE4B-210ENST00000488228 OAS2P29728 719 aaKnown RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 RPA3P35244 121 aaPredicted RBP10.65□□□□□ -0.7
UBE4B-210ENST00000488228 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms