RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ARHGEF16Q5VV41 709 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 RBMS3Q6XE24 437 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 SH2D5Q6ZV89 423 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 DGLUCYQ7Z3D6 616 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 DNAJB7Q7Z6W7 309 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 CCAR2Q8N163 923 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR13C3Q8NGS6 347 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR13J1Q8NGT2 312 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 C9orf43Q8TAL5 461 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 OTUB1Q96FW1 271 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 LINC00615Q96LM1 132 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 FER1L6-AS2Q96M78 137 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 MUS81Q96NY9 551 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 FEVQ99581 238 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 RAD9AQ99638 391 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 S1PR5Q9H228 398 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 ARRDC1-AS1Q9H2J1 176 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 TRPV4Q9HBA0 871 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 POLLQ9UGP5 575 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 SMCHD1A6NHR9 2005 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 TRAV34A0A0B4J273 112 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 LOC101059948A0A1B0GTJ6 334 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 C2orf81A6NN90 581 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 SMIM1B2RUZ4 78 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 DNM1LO00429 736 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 AP5Z1O43299 807 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 VIMP08670 466 aaKnown RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 EPCAMP16422 314 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 EPORP19235 508 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 PTPN3P26045 913 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 SOAT1P35610 550 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 NPY4RP50391 375 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 KRTAP10-3P60369 221 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 DLK1P80370 383 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 RBP5P82980 135 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 MAT1AQ00266 395 aaKnown RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 CDR2Q01850 454 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ILF2Q12905 390 aaKnown RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 GPR17Q13304 367 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 PPIGQ13427 754 aaKnown RBP eCLIP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ITGA7Q13683 1181 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ZNF273Q14593 569 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 UGCGQ16739 394 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ZC2HC1CQ53FD0 456 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 PDLIM3Q53GG5 364 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 CYP4A22Q5TCH4 519 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 C20orf194Q5TEA3 1177 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 IL27RAQ6UWB1 636 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 NUP54Q7Z3B4 507 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 GALNTL5Q7Z4T8 443 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 TRPT1Q86TN4 253 aaKnown RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 AMIGO1Q86WK6 493 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 LGI2Q8N0V4 545 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 SPEM1Q8N4L4 309 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ZNF383Q8NA42 475 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 THAP8Q8NA92 274 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR4K1Q8NGD4 311 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 GRK7Q8WTQ7 553 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 PHLDA1Q8WV24 401 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 PROX1Q92786 737 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 FBXO17Q96EF6 278 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ALG14Q96F25 216 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ERO1AQ96HE7 468 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ADPGKQ9BRR6 497 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ANKRD2Q9GZV1 360 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 MYNNQ9NPC7 610 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 SH3GLB2Q9NR46 395 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 FAM207AQ9NSI2 230 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 ZNF624Q9P2J8 865 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 DAPK2Q9UIK4 370 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 MTUS1Q9ULD2 1270 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 GRID1Q9ULK0 1009 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 C2CD2Q9Y426 696 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 LIPGQ9Y5X9 500 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 POMT1Q9Y6A1 747 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 FLT1P17948 1338 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 PCDH11YQ9BZA8 1340 aa3.44□□□□□ -1.86
HMGB1P36-201ENST00000487709 A0A1W2PPM1 405 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 O00370 1275 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 KLF11O14901 512 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 EPHB6O15197 1021 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 SNX3O60493 162 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 ACSL3O95573 720 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 CLPTM1O96005 669 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 C9P02748 559 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 PDGFRAP16234 1089 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 CD22P20273 847 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 CA4P22748 312 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 JAK1P23458 1154 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 CEACAM8P31997 349 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 CSTF2P33240 577 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 CDKN1AP38936 164 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 MAZP56270 477 aaKnown RBP3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 VEZF1Q14119 521 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 NPTX1Q15818 432 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 FAM174BQ3ZCQ3 159 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 GTDC1Q4AE62 458 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 SLC35D3Q5M8T2 416 aa3.43□□□□□ -1.86
HMGB1P36-201ENST00000487709 LCN1P1Q5VSP4 162 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms