RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ATG9BQ674R7 924 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 TBC1D3GQ6DHY5 549 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 TBC1D3CQ6IPX1 549 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 CRTC3Q6UUV7 619 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 CYP20A1Q6UW02 462 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 LCTLQ6UWM7 567 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 MYLK4Q86YV6 388 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 RGL4Q8IZJ4 473 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 TBC1D3Q8IZP1 549 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 DPP10Q8N608 796 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 OR5K2Q8NHB8 316 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 DNAJB8Q8NHS0 232 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 FAM174AQ8TBP5 190 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 WDR20Q8TBZ3 569 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 WDR60Q8WVS4 1066 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 TFGQ92734 400 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 UBE2E3Q969T4 207 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 SPDL1Q96EA4 605 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 CDRT15Q96T59 188 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 GPATCH1Q9BRR8 931 aaKnown RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 HAUS8Q9BT25 410 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 LGR4Q9BXB1 951 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 PITHD1Q9GZP4 211 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 BTBD1Q9H0C5 482 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 ATG10Q9H0Y0 220 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 POLMQ9NP87 494 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 SIRT5Q9NXA8 310 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 STX18Q9P2W9 335 aaKnown RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 LEF1Q9UJU2 399 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-207ENST00000486868 PCDHGA7Q9Y5G6 932 aa11.29□□□□□ -0.6
PRKCB-207ENST00000486868 F5P12259 2224 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 C15orf38-AP3S2A0A0A6YYH1 394 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 E7ENX8 843 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 FOXE1O00358 373 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 TRIM38O00635 465 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 CFLARO15519 480 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 LATO43561 262 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PRMT3O60678 531 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PRAMEF4O60810 478 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PSMG1O95456 288 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 CEACAM5P06731 702 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SLC2A4P14672 509 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 NDUFV2P19404 249 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ME2P23368 584 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 OXTRP30559 389 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 HALP42357 657 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ZFP36L2P47974 494 aaKnown RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 CCR5P51681 352 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 POLR2JP52435 117 aaKnown RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 C21orf58P58505 322 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 TAP2Q03519 686 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 LRRC32Q14392 662 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 CPSF6Q16630 551 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 RFTN2Q52LD8 501 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PYCR3Q53H96 274 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PAGE2BQ5JRK9 111 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SAMD4BQ5PRF9 694 aaKnown RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 IL23RQ5VWK5 629 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PRAMEF9Q5VWM5 478 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 WASH2PQ6VEQ5 465 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ZNF852Q6ZMS4 543 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SLCO4C1Q6ZQN7 724 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 FAM83HQ6ZRV2 1179 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 RIPOR1Q6ZS17 1223 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 MSANTD1Q6ZTZ1 278 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ARPINQ7Z6K5 226 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ZNF687Q8N1G0 1237 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 RAB42Q8N4Z0 105 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 DCBLD1Q8N8Z6 715 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 OR9I1Q8NGQ6 314 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 RPLP0P6Q8NHW5 317 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 PROKR1Q8TCW9 393 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 STMN2Q93045 179 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 HLA-CQ95604 372 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 OR4K3Q96R72 315 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ZBTB18Q99592 522 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 NPAS2Q99743 824 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 RAB11FIP5Q9BXF6 653 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ACPTQ9BZG2 426 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 CHRDQ9H2X0 955 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 TRIT1Q9H3H1 467 aaKnown RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 MVB12BQ9H7P6 319 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 WASH6PQ9NQA3 447 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SPATA6Q9NWH7 488 aaPredicted RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 TMEM181Q9P2C4 612 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ABCD2Q9UBJ2 740 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 SLC23A2Q9UGH3 650 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ADGRE2Q9UHX3 823 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 DUSP12Q9UNI6 340 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 POMPQ9Y244 141 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
PRKCB-207ENST00000486868 MRPS17Q9Y2R5 130 aaKnown RBP11.28□□□□□ -0.6
PRKCB-207ENST00000486868 AP3M1Q9Y2T2 418 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms