RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 RARGP13631 454 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 DARSP14868 501 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 ITGB8P26012 769 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 GABRB3P28472 473 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ADSSP30520 456 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SERPINB1P30740 379 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SLC5A2P31639 672 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PCGF2P35227 344 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 NUP62P37198 522 aaPredicted RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 ACAA2P42765 397 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 SLC1A4P43007 532 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 KIR3DL2P43630 455 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SLCO1A2P46721 670 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RASSF2P50749 326 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PSMC6P62333 389 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 MRPS21P82921 87 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 CHAF1BQ13112 559 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PMS2P11Q13670 270 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ATP1A4Q13733 1029 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SPARCL1Q14515 664 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 KRT31Q15323 416 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 NAB2Q15742 525 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 CHRNA6Q15825 494 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 EIF2S3LQ2VIR3 472 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 RARS2Q5T160 578 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 ERMARDQ5T6L9 678 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PRAMEF17Q5VTA0 474 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ANKRD40Q6AI12 368 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SUMO4Q6EEV6 95 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 VITQ6UXI7 678 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RBM44Q6ZP01 1051 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 LINC00299Q6ZSB3 139 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 MSANTD1Q6ZTZ1 278 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 FAM122BQ7Z309 247 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RABEPKQ7Z6M1 372 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TPRA1Q86W33 373 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 GPBP1Q86WP2 473 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TDRPQ86YL5 185 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TMEM139Q8IV31 216 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SRRM1Q8IYB3 904 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 NAGSQ8N159 534 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 MMGT1Q8N4V1 131 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PCDH20Q8N6Y1 951 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 LINC01465Q8N7H1 131 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ZNF366Q8N895 744 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 CAPSLQ8WWF8 208 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SLC13A3Q8WWT9 602 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 METTL21AQ8WXB1 218 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RFFLQ8WZ73 363 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TRIB2Q92519 343 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 KIAA1191Q96A73 305 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RFT1Q96AA3 541 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TAMM41Q96BW9 452 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RHBDF1Q96CC6 855 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TXNDC15Q96J42 360 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RITA1Q96K30 269 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ZNF668Q96K58 619 aaPredicted RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 ADAD1Q96M93 576 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 RIPOR3Q96MK2 946 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ZNF317Q96PQ6 595 aaPredicted RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 CSPG4P5Q96PW8 444 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 C12orf57Q99622 126 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 NAPGQ99747 312 aaPredicted RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 KIFC1Q9BW19 673 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 MRPS26Q9BYN8 205 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 TXLNGYQ9BZA5 131 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ANKRD2Q9GZV1 360 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RACGAP1Q9H0H5 632 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ALX4Q9H161 411 aaPredicted RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 C1orf21Q9H246 121 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 LRMDAQ9H2I8 198 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 GOLPH3Q9H4A6 298 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 C11orf49Q9H6J7 331 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 RMND5AQ9H871 391 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TMBIM4Q9HC24 238 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PPANQ9NQ55 473 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 TRIM36Q9NQ86 728 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 IFT46Q9NQC8 304 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ADARB2Q9NS39 739 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 COA4Q9NYJ1 87 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 TAS2R3Q9NYW6 316 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 GDE1Q9NZC3 331 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 PKD2L2Q9NZM6 624 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 ACTR3BQ9P1U1 418 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 GRHPRQ9UBQ7 328 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 GLS2Q9UI32 602 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SLC24A2Q9UI40 661 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 VPS28Q9UK41 221 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 SLC22A14Q9Y267 594 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 MRPS7Q9Y2R9 242 aaKnown RBP5.33□□□□□ -1.56
COPS3-209ENST00000486810 GDAQ9Y2T3 454 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 MAU2Q9Y6X3 613 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 KIF21BO75037 1637 aa5.33□□□□□ -1.56
COPS3-209ENST00000486810 CCDC141Q6ZP82 1450 aa5.32□□□□□ -1.56
COPS3-209ENST00000486810 DAPK1P53355 1430 aa5.32□□□□□ -1.56
COPS3-209ENST00000486810 COL15A1P39059 1388 aa5.32□□□□□ -1.56
COPS3-209ENST00000486810 RFX7Q2KHR2 1363 aa5.32□□□□□ -1.56
COPS3-209ENST00000486810 WDR17Q8IZU2 1322 aa5.32□□□□□ -1.56
COPS3-209ENST00000486810 ITSN2Q9NZM3 1697 aa5.32□□□□□ -1.56
COPS3-209ENST00000486810 A0A0U1RQV5 110 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms