RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TFB2MQ9H5Q4 396 aaKnown RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 RAD18Q9NS91 495 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 TRPS1Q9UHF7 1281 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 PCSK1NQ9UHG2 260 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 ACSL5Q9ULC5 683 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 COLEC10Q9Y6Z7 277 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 CHD3Q12873 2000 aaKnown RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 ANK3Q12955 4377 aaKnown RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 IGHV1-45A0A0A0MS14 117 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 MGAT4DA6NG13 374 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 A6NNC1 897 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 DSCR3O14972 297 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TTI1O43156 1089 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 GPR39O43194 453 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 SLC4A1P02730 911 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 CALB1P05937 261 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 SLC35G4P0C7Q5 338 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 PIM1P11309 404 aaPredicted RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 UGT2B7P16662 529 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 CA4P22748 312 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 NSFP46459 744 aaKnown RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 OR1D4P47884 311 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 CARSP49589 748 aaKnown RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 ZNF135P52742 658 aaPredicted RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 SNTB1Q13884 538 aaKnown RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 KEAP1Q14145 624 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TFDP3Q5H9I0 405 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 ABHD17BQ5VST6 288 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TMEM211Q6ICI0 200 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 ACAD10Q6JQN1 1059 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 DNAJC24Q6P3W2 148 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 CNSTQ6PJW8 725 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TMCO3Q6UWJ1 677 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 ARSKQ6UWY0 536 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 NEK10Q6ZWH5 1172 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 NLRP9Q7RTR0 991 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TMTC1Q8IUR5 882 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 PSTKQ8IV42 348 aaKnown RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 LILRA3Q8N6C8 439 aaPredicted RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 DDHD1Q8NEL9 900 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 OR52E1Q8NGJ3 308 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 GOT1L1Q8NHS2 421 aaPredicted RBP7.85□□□□□ -1.15
XRN1-212ENST00000486211 RND1Q92730 232 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 DLG3Q92796 817 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.85□□□□□ -1.15
XRN1-212ENST00000486211 ZNF653Q96CK0 615 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 OR2A14Q96R47 310 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 TRIB3Q96RU7 358 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 XKR8Q9H6D3 395 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 BRD7Q9NPI1 651 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 DMRT3Q9NQL9 472 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 C3orf18Q9UK00 162 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 PLCL2Q9UPR0 1127 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 ZNF711Q9Y462 761 aa7.85□□□□□ -1.15
XRN1-212ENST00000486211 ADARB2-AS1A8MUL3 147 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 IDSB3KWA1 339 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 AURKAO14965 403 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 HLA-DQB2P05538 268 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 UCHL3P15374 230 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 CD53P19397 219 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 MIPP30301 263 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 PTGER1P34995 402 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 RAB28P51157 221 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 ARSFP54793 590 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 DCAF7P61962 342 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 EEF1A2Q05639 463 aaKnown RBP7.84□□□□□ -1.15
XRN1-212ENST00000486211 ZNF33BQ06732 778 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 CLEC16AQ2KHT3 1053 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 FNBP1LQ5T0N5 605 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 C16orf47Q6ZP98 133 aaPredicted RBP7.84□□□□□ -1.15
XRN1-212ENST00000486211 POLNQ7Z5Q5 900 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 AMIGO1Q86WK6 493 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 CXorf67Q86X51 503 aaPredicted RBP7.84□□□□□ -1.15
XRN1-212ENST00000486211 ALDH16A1Q8IZ83 802 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 MYRIPQ8NFW9 859 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 OR2L2Q8NH16 312 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 GDAP1Q8TB36 358 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 STT3BQ8TCJ2 826 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 NAT14Q8WUY8 206 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 TMEM158Q8WZ71 300 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 TTC25Q96NG3 672 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 SLC30A3Q99726 388 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 STK33Q9BYT3 514 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 XPO4Q9C0E2 1151 aaKnown RBP7.84□□□□□ -1.15
XRN1-212ENST00000486211 PLEKHF2Q9H8W4 249 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 MAGEE1Q9HCI5 957 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 KLHL1Q9NR64 748 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 RBM22Q9NW64 420 aaKnown RBP eCLIP7.84□□□□□ -1.15
XRN1-212ENST00000486211 IRAK4Q9NWZ3 460 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 EURLQ9NYK6 297 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 CRIM1Q9NZV1 1036 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 ICKQ9UPZ9 632 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 HEBP2Q9Y5Z4 205 aa7.84□□□□□ -1.15
XRN1-212ENST00000486211 ANK2Q01484 3957 aa7.84□□□□□ -1.16
XRN1-212ENST00000486211 SNRNP200O75643 2136 aaKnown RBP7.84□□□□□ -1.16
XRN1-212ENST00000486211 ANKRD62A6NC57 917 aa7.83□□□□□ -1.16
XRN1-212ENST00000486211 H3BRJ5 948 aa7.83□□□□□ -1.16
XRN1-212ENST00000486211 M0R082 166 aa7.83□□□□□ -1.16
XRN1-212ENST00000486211 SMAD7O15105 426 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms