RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 SPANXN3Q5MJ09 141 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 ATG14Q6ZNE5 492 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 C2CD4AQ8NCU7 369 aaPredicted RBP18.82■□□□□ 0.6
SNX5-213ENST00000486039 HMGCLL1Q8TB92 370 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 MAGEC3Q8TD91 643 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 WDR83Q9BRX9 315 aaKnown RBP18.82■□□□□ 0.6
SNX5-213ENST00000486039 GPR87Q9BY21 358 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 CCDC68Q9H2F9 335 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 KLHL42Q9P2K6 505 aa18.82■□□□□ 0.6
SNX5-213ENST00000486039 A0A1W2PPV9 198 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 CDC14CA4D256 554 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 ARHGEF33A8MVX0 844 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 PSIP1O75475 530 aaKnown RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 OR2B3O76000 313 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 RECKO95980 971 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 CAPN1P07384 714 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 GABRB3P28472 473 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 ITGA8P53708 1063 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 CUL1Q13616 776 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 FASTKQ14296 549 aaKnown RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 SF1Q15637 639 aaKnown RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 HP1BP3Q5SSJ5 553 aaPredicted RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 ZNF385CQ66K41 422 aaPredicted RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 FCRL6Q6DN72 434 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 SYTL1Q8IYJ3 562 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 GPR135Q8IZ08 494 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 PDIK1LQ8N165 341 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 N4BP2L2Q92802 583 aaPredicted RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 KRT12Q99456 494 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 GPR21Q99679 349 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 NAT9Q9BTE0 207 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 AARSD1Q9BTE6 412 aaKnown RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 TRIM31Q9BZY9 425 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 SPATA7Q9P0W8 599 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 FARSAQ9Y285 508 aaKnown RBP18.81■□□□□ 0.6
SNX5-213ENST00000486039 DHRS7Q9Y394 339 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 COMMD10Q9Y6G5 202 aa18.81■□□□□ 0.6
SNX5-213ENST00000486039 SPTBP11277 2137 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 SEC31AO94979 1220 aaKnown RBP18.8■□□□□ 0.6
SNX5-213ENST00000486039 PSMB5P28074 263 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 ELK3P41970 407 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 CSRP3P50461 194 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 RPS15P62841 145 aaKnown RBP18.8■□□□□ 0.6
SNX5-213ENST00000486039 MRPS25P82663 173 aaKnown RBP18.8■□□□□ 0.6
SNX5-213ENST00000486039 TIAL1Q01085 375 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNX5-213ENST00000486039 KCNAB2Q13303 367 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 CYP2A13Q16696 494 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 PTCHD3Q3KNS1 767 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 FIGLAQ6QHK4 219 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 CYHR1Q6ZMK1 362 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 NEK10Q6ZWH5 1172 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 CNTN4Q8IWV2 1026 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 RAB42Q8N4Z0 105 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 OR9A1PQ8NGU1 263 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 CD200R1Q8TD46 325 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 APOBEC4Q8WW27 367 aaKnown RBP18.8■□□□□ 0.6
SNX5-213ENST00000486039 INPP5DQ92835 1189 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 TRIM4Q9C037 500 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 SLC7A5P2Q9GIP4 190 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 PLCL2Q9UPR0 1127 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 MYO18BQ8IUG5 2567 aa18.8■□□□□ 0.6
SNX5-213ENST00000486039 MYO1CO00159 1063 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 SMAPO00193 183 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 RAB40ALP0C0E4 278 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 ERGP11308 486 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 CARSP49589 748 aaKnown RBP18.79■□□□□ 0.6
SNX5-213ENST00000486039 TTLL9Q3SXZ7 439 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 FAM198BQ6UWH4 519 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 ZNF655Q8N720 491 aaPredicted RBP18.79■□□□□ 0.6
SNX5-213ENST00000486039 ENDOVQ8N8Q3 282 aaKnown RBP18.79■□□□□ 0.6
SNX5-213ENST00000486039 OR2A1Q8NGT9 310 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 CERS2Q96G23 380 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 SNF8Q96H20 258 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 NDNQ99608 321 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 EURLQ9NYK6 297 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 SLC17A6Q9P2U8 582 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 TUBD1Q9UJT1 453 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 CHMP2BQ9UQN3 213 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 POLHQ9Y253 713 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 KCNMB2Q9Y691 235 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 TEX264Q9Y6I9 313 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 AP1M2Q9Y6Q5 423 aa18.79■□□□□ 0.6
SNX5-213ENST00000486039 TLN1Q9Y490 2541 aaKnown RBP18.79■□□□□ 0.6
SNX5-213ENST00000486039 EFCAB8A8MWE9 144 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 ZSCAN9O15535 394 aaPredicted RBP18.78■□□□□ 0.6
SNX5-213ENST00000486039 SNRNP200O75643 2136 aaKnown RBP18.78■□□□□ 0.6
SNX5-213ENST00000486039 FKBP9O95302 570 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 AHSGP02765 367 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 CATP04040 527 aaKnown RBP18.78■□□□□ 0.6
SNX5-213ENST00000486039 HBQ1P09105 142 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 MPC1LP0DKB6 136 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 CBSLP0DN79 551 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 CBSP35520 551 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 GRIA3P42263 894 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 RPL21P46778 160 aaKnown RBP18.78■□□□□ 0.6
SNX5-213ENST00000486039 YBX1P67809 324 aaKnown RBP18.78■□□□□ 0.6
SNX5-213ENST00000486039 IL10RAQ13651 578 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 FAM69BQ5VUD6 431 aa18.78■□□□□ 0.6
SNX5-213ENST00000486039 RHBDD2Q6NTF9 364 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms