RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NAA20P61599 178 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 HNRNPKP61978 463 aaKnown RBP eCLIP10.98□□□□□ -0.65
SND1-212ENST00000485871 UBE2IP63279 158 aaKnown RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 COL9A2Q14055 689 aaPredicted RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 ZNF423Q2M1K9 1284 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 SPRED3Q2MJR0 410 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 PTCHD3Q3KNS1 767 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 PRRT3Q5FWE3 981 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 ARL13AQ5H913 290 aaPredicted RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 PRAMEF14Q5SWL7 426 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 ANKS6Q68DC2 871 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 CYB5D1Q6P9G0 228 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 TTC23LQ6PF05 361 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 IYDQ6PHW0 289 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 AGTRAPQ6RW13 159 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 RAB44Q7Z6P3 723 aaPredicted RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 CLNKQ7Z7G1 428 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 C17orf82Q86X59 251 aaPredicted RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 SDR16C5Q8N3Y7 309 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 ZNF548Q8NEK5 533 aaPredicted RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 MAGEC3Q8TD91 643 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 ZNF480Q8WV37 535 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 PATE1Q8WXA2 126 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 PIGKQ92643 395 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 RAD51AP1Q96B01 352 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 HIST1H2AHQ96KK5 128 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 NRTNQ99748 197 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 HIST1H2AJQ99878 128 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 H2AFJQ9BTM1 129 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 TRIT1Q9H3H1 467 aaKnown RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 MVB12BQ9H7P6 319 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 KCNK13Q9HB14 408 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 TNFRSF12AQ9NP84 129 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 IMP3Q9NV31 184 aaKnown RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 WWOXQ9NZC7 414 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 SPATA7Q9P0W8 599 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 SPASTQ9UBP0 616 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 HEY2Q9UBP5 337 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 CIDEBQ9UHD4 219 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 DCTN4Q9UJW0 460 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 ZNF225Q9UK10 706 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 APOBEC2Q9Y235 224 aaKnown RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 TNPO3Q9Y5L0 923 aaKnown RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 ARID1BQ8NFD5 2236 aaPredicted RBP10.98□□□□□ -0.65
SND1-212ENST00000485871 FRYLO94915 3013 aa10.98□□□□□ -0.65
SND1-212ENST00000485871 HEATR5BQ9P2D3 2071 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 ZFHX4Q86UP3 3567 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 E7ENX8 843 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 SLCO1B7G3V0H7 640 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 K7EPI3 171 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 OR7A17O14581 309 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 MGRN1O60291 552 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 PRAMEF4O60810 478 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 EPN2O95208 641 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 RPN2P04844 631 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 CTSEP14091 401 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 ALOX15P16050 662 aaPredicted RBP10.97□□□□□ -0.65
SND1-212ENST00000485871 CALB2P22676 271 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 MAP4P27816 1152 aaKnown RBP10.97□□□□□ -0.65
SND1-212ENST00000485871 PTPN4P29074 926 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 PKLRP30613 574 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 HALP42357 657 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 DPP6P42658 865 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 TAP2Q03519 686 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 CLCQ05315 142 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 PCDH1Q08174 1060 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 SF3A3Q12874 501 aaKnown RBP eCLIP10.97□□□□□ -0.654e-15■■■■□ 20.5
SND1-212ENST00000485871 FASTKQ14296 549 aaKnown RBP10.97□□□□□ -0.65
SND1-212ENST00000485871 ARHGAP19Q14CB8 494 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 ELOCQ15369 112 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 CYP2A13Q16696 494 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 DUOXA1Q1HG43 343 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 PRAMEF9Q5VWM5 478 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 FAM219BQ5XKK7 198 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 SLC23A3Q6PIS1 610 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 LRRC70Q7Z2Q7 622 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 GOLGA7Q7Z5G4 137 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 TAF8Q7Z7C8 310 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 MTDHQ86UE4 582 aaKnown RBP10.97□□□□□ -0.65
SND1-212ENST00000485871 PARP9Q8IXQ6 854 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 ARHGAP24Q8N264 748 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 SFRP1Q8N474 314 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 CCNYL1Q8N7R7 359 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 RFWD2Q8NHY2 731 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 HMGCLL1Q8TB92 370 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 NSL1Q96IY1 281 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 LOXL4Q96JB6 756 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 CAMK1GQ96NX5 476 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 IL17FQ96PD4 163 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 OR4K3Q96R72 315 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 FERD3LQ96RJ6 166 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 ELF4Q99607 663 aaPredicted RBP10.97□□□□□ -0.65
SND1-212ENST00000485871 HGH1Q9BTY7 390 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 TRMOQ9BU70 441 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 SGPP1Q9BX95 441 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 ATG10Q9H0Y0 220 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 SLC32A1Q9H598 525 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 KIR3DX1Q9H7L2 352 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 MRGBPQ9NV56 204 aa10.97□□□□□ -0.65
SND1-212ENST00000485871 UCKL1Q9NWZ5 548 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms