RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 MAGP20916 626 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 IMPA1P29218 277 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 RPA3P35244 121 aaPredicted RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 SERPINB8P50452 374 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 MC2RQ01718 297 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 TUBB3Q13509 450 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 CSHL1Q14406 222 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 SLC29A2Q14542 456 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 ARHGAP19Q14CB8 494 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 SF1Q15637 639 aaKnown RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 GPR19Q15760 415 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 CYP2A13Q16696 494 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 TMEM164Q5U3C3 297 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 IGF2-ASQ6U949 168 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 FRA10AC1Q70Z53 315 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 CARFQ8N187 725 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 HMGCLL1Q8TB92 370 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.43□□□□□ -0.58
HPS4-214ENST00000485842 SLC22A18Q96BI1 424 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 ALKBH8Q96BT7 664 aaKnown RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 PDLIM5Q96HC4 596 aaKnown RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 HIST1H2AHQ96KK5 128 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 ZNF578Q96N58 590 aaPredicted RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 TRAPPC9Q96Q05 1148 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 TAAR9Q96RI9 348 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 MIPEPQ99797 713 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 HIST1H2AJQ99878 128 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 H2AFJQ9BTM1 129 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 ACAT2Q9BWD1 397 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 TRIM54Q9BYV2 358 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 EPB41L4BQ9H329 900 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 SNX15Q9NRS6 342 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 WDR70Q9NW82 654 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 SEMA5BQ9P283 1151 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 STOX2Q9P2F5 926 aaPredicted RBP11.43□□□□□ -0.58
HPS4-214ENST00000485842 DKK4Q9UBT3 224 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 BTRCQ9Y297 605 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 PCDHB11Q9Y5F2 797 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 B3GALT1Q9Y5Z6 326 aa11.43□□□□□ -0.58
HPS4-214ENST00000485842 A0A1W2PPV9 198 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 HMX2A2RU54 273 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 CDRT15L2A8MXV6 281 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 C9orf172C9J069 976 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 POLR1CO15160 346 aaPredicted RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 MAP3K7O43318 606 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TLX3O43711 291 aaPredicted RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 KRT38O76015 456 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 WISP3O95389 354 aaPredicted RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 GUCA1CO95843 209 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 ENO2P09104 434 aaPredicted RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 SLC35E2BP0CK96 405 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 CRABP2P29373 138 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TYK2P29597 1187 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 HSD17B2P37059 387 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 SERPINB9P50453 376 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 PCBP4P57723 403 aaKnown RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 RAB15P59190 212 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 ERVPABLB-1P60509 514 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TBPL1P62380 186 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 IRF9Q00978 393 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 ACY1Q03154 408 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TSNQ15631 228 aaKnown RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 ZIC1Q15915 447 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 DEFB110Q30KQ9 67 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TAF1BQ53T94 588 aaPredicted RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 DCAF12Q5T6F0 453 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 THEMIS2Q5TEJ8 643 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 WDR93Q6P2C0 686 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 SBSNQ6UWP8 590 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 CEACAM20Q6UY09 585 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 CLEC14AQ86T13 490 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 ADAMTSL2Q86TH1 951 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TBC1D1Q86TI0 1168 aaPredicted RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 D2HGDHQ8N465 521 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 DCAKDQ8WVC6 231 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 FGF11Q92914 225 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 MED8Q96G25 268 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 NAF1Q96HR8 494 aaKnown RBP11.42□□□□□ -0.58
HPS4-214ENST00000485842 CCDC138Q96M89 665 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 EGFL8Q99944 293 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 DDA1Q9BW61 102 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 DERL2Q9GZP9 239 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TWSG1Q9GZX9 223 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 ATG10Q9H0Y0 220 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 PDE7BQ9NP56 450 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 FBXO8Q9NRD0 319 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 FGF21Q9NSA1 209 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 ARL15Q9NXU5 204 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TAC3Q9UHF0 121 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 RARRES3Q9UL19 164 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 RAXQ9Y2V3 346 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 PCDHGA7Q9Y5G6 932 aa11.42□□□□□ -0.58
HPS4-214ENST00000485842 TMEM150CB9EJG8 249 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 TRIM49D1C9J1S8 452 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 E7ENX8 843 aa11.41□□□□□ -0.58
HPS4-214ENST00000485842 NVLO15381 856 aaKnown RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 PRICKLE3O43900 615 aaPredicted RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 ALDOAP04075 364 aaKnown RBP11.41□□□□□ -0.58
HPS4-214ENST00000485842 CAPNS1P04632 268 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms