RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CDKL2Q92772 493 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 SLC45A3Q96JT2 553 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 PKP4Q99569 1192 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 MIPEPQ99797 713 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 SPRTNQ9H040 489 aaPredicted RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 FAM60AQ9NP50 221 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 NSMCE4AQ9NXX6 385 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 TXNDC16Q9P2K2 825 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 SLC17A6Q9P2U8 582 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 IL17BQ9UHF5 180 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 CORO1CQ9ULV4 474 aaPredicted RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 PLCL2Q9UPR0 1127 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 E7ESA3 106 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ATXN7O15265 892 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 NKX2-8O15522 239 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ZNF749O43361 778 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FKBP9O95302 570 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 AGXTP21549 392 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 GRIA3P42263 894 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 PNLIPRP1P54315 467 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 CDKN2DP55273 166 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 SLC7A5Q01650 507 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 DNASE1L3Q13609 305 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FASTKQ14296 549 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FRG1Q14331 258 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ZIC1Q15915 447 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 SOWAHCQ53LP3 525 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ZC3H12BQ5HYM0 836 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 HECTD2Q5U5R9 776 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FAM45BPQ6NSW5 357 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FAM199XQ6PEV8 388 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 PAQR3Q6TCH7 311 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 SUSD1Q6UWL2 747 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ZNF572Q7Z3I7 529 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 PIWIL4Q7Z3Z4 852 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 STRA8Q7Z7C7 330 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 GALNT7Q86SF2 657 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 MCATQ8IVS2 390 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FLVCR1-AS1Q8TAF5 88 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 FAM45AQ8TCE6 357 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 EEF1AKMT1Q8WVE0 214 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ASB11Q8WXH4 323 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 EXTL1Q92935 676 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 CATSPER2Q96P56 530 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 MENTQ9BUN1 341 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 ACAT2Q9BWD1 397 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 SLC12A9Q9BXP2 914 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 MRPS30Q9NP92 439 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 TXLNGQ9NUQ3 528 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 VWA7Q9Y334 891 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 MRPS18BQ9Y676 258 aaKnown RBP12.05□□□□□ -0.48
PTCD1-205ENST00000485746 AP1M2Q9Y6Q5 423 aa12.05□□□□□ -0.48
PTCD1-205ENST00000485746 KMT2BQ9UMN6 2715 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 C21orf140B9A014 251 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 MYO1CO00159 1063 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 MEN1O00255 615 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 EIF3FO00303 357 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 CCNDBP1O95273 360 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 ITGB2P05107 769 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 C8GP07360 202 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 HIST1H2AGP0C0S8 130 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 HIST1H2ADP20671 130 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 PSMB5P28074 263 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 GABRB3P28472 473 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 SLC12A2P55011 1212 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 IL2P60568 153 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 GPS2Q13227 327 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 ERV3-1Q14264 604 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 ARHGAP19Q14CB8 494 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 NAA25Q14CX7 972 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 TBR1Q16650 682 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 DEFB109BQ30KR1 87 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 TLDC1Q6P9B6 456 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 CYHR1Q6ZMK1 362 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 C3orf62Q6ZUJ4 267 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 DNAJC22Q8N4W6 341 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 ZNF655Q8N720 491 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 LSM14AQ8ND56 463 aaKnown RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 HMGCLL1Q8TB92 370 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 DENND1AQ8TEH3 1009 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 ZUFSPQ96AP4 578 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 ALKBH8Q96BT7 664 aaKnown RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 LINGO1Q96FE5 620 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 HIST1H2AHQ96KK5 128 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 HIST1H2AJQ99878 128 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 WDR83Q9BRX9 315 aaKnown RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 H2AFJQ9BTM1 129 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 NDC1Q9BTX1 674 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 TRIM54Q9BYV2 358 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 TWSG1Q9GZX9 223 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 UTP6Q9NYH9 597 aaKnown RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 EURLQ9NYK6 297 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 GRHL1Q9NZI5 618 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 NDOR1Q9UHB4 597 aa12.04□□□□□ -0.48
PTCD1-205ENST00000485746 GPN3Q9UHW5 284 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-205ENST00000485746 FARSAQ9Y285 508 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms